Gene : evm_27.TU.AmTr_v1.0_scaffold00009.276 A. trichopoda v1.0
Defline:  (1 of 3) PTHR11592//PTHR11592:SF42 - GLUTATHIONE PEROXIDASE Genomic Order:  273
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00009.276 Secondary Identifier:  ? PAC:31568772
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda DETOX1-PWY-1 Amborella trichopoda pathologic  
Atrichopoda PWY-4081 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00009.276 0.5kb upstream 0.5kb upstream 5004 true AmTr_v1.0_scaffold00009: 6885385-6890388 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.276 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00009: 6889889-6890388 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.276 0.5kb downstream 0.5kb downstream 5004 true AmTr_v1.0_scaffold00009: 6884885-6889888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.276 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00009: 6884885-6885384 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.276 1.0kb upstream 1.0kb upstream 5504 true AmTr_v1.0_scaffold00009: 6885385-6890888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.276 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00009: 6889889-6890888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.276 1.0kb downstream 1.0kb downstream 5504 true AmTr_v1.0_scaffold00009: 6884385-6889888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.276 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00009: 6884385-6885384 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.276 2.0kb upstream 2.0kb upstream 6504 true AmTr_v1.0_scaffold00009: 6885385-6891888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.276 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00009: 6889889-6891888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.276 2.0kb downstream 2.0kb downstream 6504 true AmTr_v1.0_scaffold00009: 6883385-6889888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.276 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00009: 6883385-6885384 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.276 5.0kb upstream 5.0kb upstream 9504 true AmTr_v1.0_scaffold00009: 6885385-6894888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.276 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00009: 6889889-6894888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.276 5.0kb downstream 5.0kb downstream 9504 true AmTr_v1.0_scaffold00009: 6880385-6889888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.276 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00009: 6880385-6885384 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.276 10.0kb upstream 10.0kb upstream 14504 true AmTr_v1.0_scaffold00009: 6885385-6899888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.276 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00009: 6889889-6899888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.276 10.0kb downstream 10.0kb downstream 14504 true AmTr_v1.0_scaffold00009: 6875385-6889888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.276 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00009: 6875385-6885384 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain