Gene : evm_27.TU.AmTr_v1.0_scaffold00009.262 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11588//PTHR11588:SF124 - TUBULIN Genomic Order:  259
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00009.262 Secondary Identifier:  ? PAC:31568592
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5695 Amborella trichopoda pathologic  
Atrichopoda PWY-6608 Amborella trichopoda pathologic  
Atrichopoda PWY-6609 Amborella trichopoda pathologic  
Atrichopoda PWY-7179 Amborella trichopoda pathologic  
Atrichopoda SALVADEHYPOX-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00009.262 0.5kb upstream 0.5kb upstream 5189 true AmTr_v1.0_scaffold00009: 6513151-6518339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.262 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00009: 6517840-6518339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.262 0.5kb downstream 0.5kb downstream 5189 true AmTr_v1.0_scaffold00009: 6512651-6517839 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.262 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00009: 6512651-6513150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.262 1.0kb upstream 1.0kb upstream 5689 true AmTr_v1.0_scaffold00009: 6513151-6518839 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.262 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00009: 6517840-6518839 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.262 1.0kb downstream 1.0kb downstream 5689 true AmTr_v1.0_scaffold00009: 6512151-6517839 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.262 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00009: 6512151-6513150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.262 2.0kb upstream 2.0kb upstream 6689 true AmTr_v1.0_scaffold00009: 6513151-6519839 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.262 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00009: 6517840-6519839 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.262 2.0kb downstream 2.0kb downstream 6689 true AmTr_v1.0_scaffold00009: 6511151-6517839 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.262 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00009: 6511151-6513150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.262 5.0kb upstream 5.0kb upstream 9689 true AmTr_v1.0_scaffold00009: 6513151-6522839 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.262 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00009: 6517840-6522839 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.262 5.0kb downstream 5.0kb downstream 9689 true AmTr_v1.0_scaffold00009: 6508151-6517839 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.262 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00009: 6508151-6513150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.262 10.0kb upstream 10.0kb upstream 14689 true AmTr_v1.0_scaffold00009: 6513151-6527839 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.262 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00009: 6517840-6527839 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.262 10.0kb downstream 10.0kb downstream 14689 true AmTr_v1.0_scaffold00009: 6503151-6517839 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.262 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00009: 6503151-6513150 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049584 5273 Angiosperm View MSA
121311488 5274 Embryophyte View MSA
123348779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain