Gene : evm_27.TU.AmTr_v1.0_scaffold00009.343 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10491 - DTDP-4-DEHYDRORHAMNOSE REDUCTASE Genomic Order:  340
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00009.343 Secondary Identifier:  ? PAC:31568611
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda ETHYL-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-5041 Amborella trichopoda pathologic  
Atrichopoda PWY-7270 Amborella trichopoda pathologic  
Atrichopoda PWY-7528 Amborella trichopoda pathologic  
Atrichopoda SAM-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00009.343 0.5kb upstream 0.5kb upstream 10824 true AmTr_v1.0_scaffold00009: 7903843-7914666 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.343 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00009: 7903843-7904342 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.343 0.5kb downstream 0.5kb downstream 10824 true AmTr_v1.0_scaffold00009: 7904343-7915166 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.343 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00009: 7914667-7915166 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.343 1.0kb upstream 1.0kb upstream 11324 true AmTr_v1.0_scaffold00009: 7903343-7914666 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.343 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00009: 7903343-7904342 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.343 1.0kb downstream 1.0kb downstream 11324 true AmTr_v1.0_scaffold00009: 7904343-7915666 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.343 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00009: 7914667-7915666 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.343 2.0kb upstream 2.0kb upstream 12324 true AmTr_v1.0_scaffold00009: 7902343-7914666 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.343 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00009: 7902343-7904342 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.343 2.0kb downstream 2.0kb downstream 12324 true AmTr_v1.0_scaffold00009: 7904343-7916666 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.343 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00009: 7914667-7916666 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.343 5.0kb upstream 5.0kb upstream 15324 true AmTr_v1.0_scaffold00009: 7899343-7914666 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.343 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00009: 7899343-7904342 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.343 5.0kb downstream 5.0kb downstream 15324 true AmTr_v1.0_scaffold00009: 7904343-7919666 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.343 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00009: 7914667-7919666 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.343 10.0kb upstream 10.0kb upstream 20324 true AmTr_v1.0_scaffold00009: 7894343-7914666 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.343 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00009: 7894343-7904342 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.343 10.0kb downstream 10.0kb downstream 20324 true AmTr_v1.0_scaffold00009: 7904343-7924666 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.343 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00009: 7914667-7924666 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046148 5273 Angiosperm View MSA
121346812 5274 Embryophyte View MSA
123424817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain