Gene : evm_27.TU.AmTr_v1.0_scaffold00009.300 A. trichopoda v1.0
Defline:  (1 of 2) PTHR22855:SF38 - ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT ALPHA, CHLOROPLASTIC Genomic Order:  297
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00009.300 Secondary Identifier:  ? PAC:31568697
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY0-1264 Amborella trichopoda pathologic  
Atrichopoda PWY-4381 Amborella trichopoda pathologic  
Atrichopoda PWY-5156 Amborella trichopoda pathologic  
Atrichopoda PWY-7388 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00009.300 0.5kb upstream 0.5kb upstream 11321 true AmTr_v1.0_scaffold00009: 7286335-7297655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.300 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00009: 7297156-7297655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.300 0.5kb downstream 0.5kb downstream 11321 true AmTr_v1.0_scaffold00009: 7285835-7297155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.300 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00009: 7285835-7286334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.300 1.0kb upstream 1.0kb upstream 11821 true AmTr_v1.0_scaffold00009: 7286335-7298155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.300 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00009: 7297156-7298155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.300 1.0kb downstream 1.0kb downstream 11821 true AmTr_v1.0_scaffold00009: 7285335-7297155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.300 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00009: 7285335-7286334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.300 2.0kb upstream 2.0kb upstream 12821 true AmTr_v1.0_scaffold00009: 7286335-7299155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.300 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00009: 7297156-7299155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.300 2.0kb downstream 2.0kb downstream 12821 true AmTr_v1.0_scaffold00009: 7284335-7297155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.300 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00009: 7284335-7286334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.300 5.0kb upstream 5.0kb upstream 15821 true AmTr_v1.0_scaffold00009: 7286335-7302155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.300 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00009: 7297156-7302155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.300 5.0kb downstream 5.0kb downstream 15821 true AmTr_v1.0_scaffold00009: 7281335-7297155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.300 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00009: 7281335-7286334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.300 10.0kb upstream 10.0kb upstream 20821 true AmTr_v1.0_scaffold00009: 7286335-7307155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.300 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00009: 7297156-7307155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.300 10.0kb downstream 10.0kb downstream 20821 true AmTr_v1.0_scaffold00009: 7276335-7297155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.300 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00009: 7276335-7286334 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050558 5273 Angiosperm View MSA
121311992 5274 Embryophyte View MSA
123426636 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain