Gene : evm_27.TU.AmTr_v1.0_scaffold00009.217 A. trichopoda v1.0
Defline:  (1 of 78) PF02458 - Transferase family (Transferase) Genomic Order:  215
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00009.217 Secondary Identifier:  ? PAC:31568783
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00009.217 0.5kb upstream 0.5kb upstream 1052 true AmTr_v1.0_scaffold00009: 5629241-5630292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.217 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00009: 5629793-5630292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.217 0.5kb downstream 0.5kb downstream 1052 true AmTr_v1.0_scaffold00009: 5628741-5629792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.217 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00009: 5628741-5629240 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.217 1.0kb upstream 1.0kb upstream 1552 true AmTr_v1.0_scaffold00009: 5629241-5630792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.217 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00009: 5629793-5630792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.217 1.0kb downstream 1.0kb downstream 1552 true AmTr_v1.0_scaffold00009: 5628241-5629792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.217 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00009: 5628241-5629240 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.217 2.0kb upstream 2.0kb upstream 2552 true AmTr_v1.0_scaffold00009: 5629241-5631792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.217 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00009: 5629793-5631792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.217 2.0kb downstream 2.0kb downstream 2552 true AmTr_v1.0_scaffold00009: 5627241-5629792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.217 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00009: 5627241-5629240 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.217 5.0kb upstream 5.0kb upstream 5552 true AmTr_v1.0_scaffold00009: 5629241-5634792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.217 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00009: 5629793-5634792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.217 5.0kb downstream 5.0kb downstream 5552 true AmTr_v1.0_scaffold00009: 5624241-5629792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.217 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00009: 5624241-5629240 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.217 10.0kb upstream 10.0kb upstream 10552 true AmTr_v1.0_scaffold00009: 5629241-5639792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.217 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00009: 5629793-5639792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.217 10.0kb downstream 10.0kb downstream 10552 true AmTr_v1.0_scaffold00009: 5619241-5629792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00009.217 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00009: 5619241-5629240 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122034579 5273 Angiosperm Singleton cluster - no MSA
121303483 5274 Embryophyte Singleton cluster - no MSA
123341152 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain