Gene : evm_27.TU.AmTr_v1.0_scaffold00008.74 A. trichopoda v1.0
Defline:  (1 of 1) 6.3.4.11 - Biotin--[methylcrotonoyl-CoA-carboxylase] ligase / Biotin--[methylcrotonoyl-CoA-carboxylase] synthetase Genomic Order:  74
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00008.74 Secondary Identifier:  ? PAC:31569288
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY0-1264 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00008.74 0.5kb upstream 0.5kb upstream 17613 true AmTr_v1.0_scaffold00008: 2210434-2228046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.74 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00008: 2210434-2210933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.74 0.5kb downstream 0.5kb downstream 17613 true AmTr_v1.0_scaffold00008: 2210934-2228546 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.74 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00008: 2228047-2228546 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.74 1.0kb upstream 1.0kb upstream 18113 true AmTr_v1.0_scaffold00008: 2209934-2228046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.74 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00008: 2209934-2210933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.74 1.0kb downstream 1.0kb downstream 18113 true AmTr_v1.0_scaffold00008: 2210934-2229046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.74 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00008: 2228047-2229046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.74 2.0kb upstream 2.0kb upstream 19113 true AmTr_v1.0_scaffold00008: 2208934-2228046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.74 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00008: 2208934-2210933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.74 2.0kb downstream 2.0kb downstream 19113 true AmTr_v1.0_scaffold00008: 2210934-2230046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.74 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00008: 2228047-2230046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.74 5.0kb upstream 5.0kb upstream 22113 true AmTr_v1.0_scaffold00008: 2205934-2228046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.74 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00008: 2205934-2210933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.74 5.0kb downstream 5.0kb downstream 22113 true AmTr_v1.0_scaffold00008: 2210934-2233046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.74 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00008: 2228047-2233046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.74 10.0kb upstream 10.0kb upstream 27113 true AmTr_v1.0_scaffold00008: 2200934-2228046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.74 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00008: 2200934-2210933 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.74 10.0kb downstream 10.0kb downstream 27113 true AmTr_v1.0_scaffold00008: 2210934-2238046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00008.74 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00008: 2228047-2238046 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046885 5273 Angiosperm View MSA
121347515 5274 Embryophyte View MSA
123426714 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain