Gene : evm_27.TU.AmTr_v1.0_scaffold00010.487 A. trichopoda v1.0
Defline:  (1 of 13) 3.1.1.32 - Phospholipase A(1) / Phospholipase A1 Genomic Order:  483
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00010.487 Secondary Identifier:  ? PAC:31572947
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda LIPASYN-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-6803 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00010.487 0.5kb upstream 0.5kb upstream 2228 true AmTr_v1.0_scaffold00010: 8172621-8174848 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.487 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00010: 8174349-8174848 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.487 0.5kb downstream 0.5kb downstream 2228 true AmTr_v1.0_scaffold00010: 8172121-8174348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.487 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00010: 8172121-8172620 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.487 1.0kb upstream 1.0kb upstream 2728 true AmTr_v1.0_scaffold00010: 8172621-8175348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.487 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00010: 8174349-8175348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.487 1.0kb downstream 1.0kb downstream 2728 true AmTr_v1.0_scaffold00010: 8171621-8174348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.487 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00010: 8171621-8172620 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.487 2.0kb upstream 2.0kb upstream 3728 true AmTr_v1.0_scaffold00010: 8172621-8176348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.487 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00010: 8174349-8176348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.487 2.0kb downstream 2.0kb downstream 3728 true AmTr_v1.0_scaffold00010: 8170621-8174348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.487 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00010: 8170621-8172620 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.487 5.0kb upstream 5.0kb upstream 6728 true AmTr_v1.0_scaffold00010: 8172621-8179348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.487 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00010: 8174349-8179348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.487 5.0kb downstream 5.0kb downstream 6728 true AmTr_v1.0_scaffold00010: 8167621-8174348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.487 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00010: 8167621-8172620 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.487 10.0kb upstream 10.0kb upstream 11728 true AmTr_v1.0_scaffold00010: 8172621-8184348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.487 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00010: 8174349-8184348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.487 10.0kb downstream 10.0kb downstream 11728 true AmTr_v1.0_scaffold00010: 8162621-8174348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.487 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00010: 8162621-8172620 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045871 5273 Angiosperm View MSA
121350475 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain