Gene : evm_27.TU.AmTr_v1.0_scaffold00010.354 A. trichopoda v1.0
Defline:  (1 of 2) 5.1.3.3 - Aldose 1-epimerase / Mutarotase Genomic Order:  351
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00010.354 Secondary Identifier:  ? PAC:31573054
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY66-422 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00010.354 0.5kb upstream 0.5kb upstream 3436 true AmTr_v1.0_scaffold00010: 6371343-6374778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.354 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00010: 6371343-6371842 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.354 0.5kb downstream 0.5kb downstream 3436 true AmTr_v1.0_scaffold00010: 6371843-6375278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.354 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00010: 6374779-6375278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.354 1.0kb upstream 1.0kb upstream 3936 true AmTr_v1.0_scaffold00010: 6370843-6374778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.354 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00010: 6370843-6371842 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.354 1.0kb downstream 1.0kb downstream 3936 true AmTr_v1.0_scaffold00010: 6371843-6375778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.354 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00010: 6374779-6375778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.354 2.0kb upstream 2.0kb upstream 4936 true AmTr_v1.0_scaffold00010: 6369843-6374778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.354 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00010: 6369843-6371842 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.354 2.0kb downstream 2.0kb downstream 4936 true AmTr_v1.0_scaffold00010: 6371843-6376778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.354 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00010: 6374779-6376778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.354 5.0kb upstream 5.0kb upstream 7936 true AmTr_v1.0_scaffold00010: 6366843-6374778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.354 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00010: 6366843-6371842 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.354 5.0kb downstream 5.0kb downstream 7936 true AmTr_v1.0_scaffold00010: 6371843-6379778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.354 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00010: 6374779-6379778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.354 10.0kb upstream 10.0kb upstream 12936 true AmTr_v1.0_scaffold00010: 6361843-6374778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.354 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00010: 6361843-6371842 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.354 10.0kb downstream 10.0kb downstream 12936 true AmTr_v1.0_scaffold00010: 6371843-6384778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.354 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00010: 6374779-6384778 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044460 5273 Angiosperm View MSA
121310296 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain