Gene : evm_27.TU.AmTr_v1.0_scaffold00010.270 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12959 - GPI TRANSAMIDASE COMPONENT PIG-T-RELATED Genomic Order:  268
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00010.270 Secondary Identifier:  ? PAC:31572752
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00010.270 0.5kb upstream 0.5kb upstream 4469 true AmTr_v1.0_scaffold00010: 5053807-5058275 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.270 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00010: 5057776-5058275 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.270 0.5kb downstream 0.5kb downstream 4469 true AmTr_v1.0_scaffold00010: 5053307-5057775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.270 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00010: 5053307-5053806 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.270 1.0kb upstream 1.0kb upstream 4969 true AmTr_v1.0_scaffold00010: 5053807-5058775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.270 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00010: 5057776-5058775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.270 1.0kb downstream 1.0kb downstream 4969 true AmTr_v1.0_scaffold00010: 5052807-5057775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.270 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00010: 5052807-5053806 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.270 2.0kb upstream 2.0kb upstream 5969 true AmTr_v1.0_scaffold00010: 5053807-5059775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.270 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00010: 5057776-5059775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.270 2.0kb downstream 2.0kb downstream 5969 true AmTr_v1.0_scaffold00010: 5051807-5057775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.270 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00010: 5051807-5053806 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.270 5.0kb upstream 5.0kb upstream 8969 true AmTr_v1.0_scaffold00010: 5053807-5062775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.270 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00010: 5057776-5062775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.270 5.0kb downstream 5.0kb downstream 8969 true AmTr_v1.0_scaffold00010: 5048807-5057775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.270 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00010: 5048807-5053806 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.270 10.0kb upstream 10.0kb upstream 13969 true AmTr_v1.0_scaffold00010: 5053807-5067775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.270 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00010: 5057776-5067775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.270 10.0kb downstream 10.0kb downstream 13969 true AmTr_v1.0_scaffold00010: 5043807-5057775 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.270 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00010: 5043807-5053806 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043448 5273 Angiosperm View MSA
121344802 5274 Embryophyte View MSA
123425263 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain