Gene : evm_27.TU.AmTr_v1.0_scaffold00010.225 A. trichopoda v1.0
Defline:  (1 of 274) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  224
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00010.225 Secondary Identifier:  ? PAC:31572946
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00010.225 0.5kb upstream 0.5kb upstream 2288 true AmTr_v1.0_scaffold00010: 4358331-4360618 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.225 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00010: 4360119-4360618 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.225 0.5kb downstream 0.5kb downstream 2288 true AmTr_v1.0_scaffold00010: 4357831-4360118 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.225 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00010: 4357831-4358330 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.225 1.0kb upstream 1.0kb upstream 2788 true AmTr_v1.0_scaffold00010: 4358331-4361118 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.225 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00010: 4360119-4361118 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.225 1.0kb downstream 1.0kb downstream 2788 true AmTr_v1.0_scaffold00010: 4357331-4360118 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.225 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00010: 4357331-4358330 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.225 2.0kb upstream 2.0kb upstream 3788 true AmTr_v1.0_scaffold00010: 4358331-4362118 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.225 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00010: 4360119-4362118 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.225 2.0kb downstream 2.0kb downstream 3788 true AmTr_v1.0_scaffold00010: 4356331-4360118 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.225 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00010: 4356331-4358330 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.225 5.0kb upstream 5.0kb upstream 6788 true AmTr_v1.0_scaffold00010: 4358331-4365118 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.225 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00010: 4360119-4365118 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.225 5.0kb downstream 5.0kb downstream 6788 true AmTr_v1.0_scaffold00010: 4353331-4360118 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.225 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00010: 4353331-4358330 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.225 10.0kb upstream 10.0kb upstream 11788 true AmTr_v1.0_scaffold00010: 4358331-4370118 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.225 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00010: 4360119-4370118 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.225 10.0kb downstream 10.0kb downstream 11788 true AmTr_v1.0_scaffold00010: 4348331-4360118 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.225 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00010: 4348331-4358330 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048735 5273 Angiosperm View MSA
121311088 5274 Embryophyte View MSA
123348435 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain