Gene : evm_27.TU.AmTr_v1.0_scaffold00010.222 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23315:SF66 - CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 1 Genomic Order:  221
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00010.222 Secondary Identifier:  ? PAC:31572638
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00010.222 0.5kb upstream 0.5kb upstream 10418 true AmTr_v1.0_scaffold00010: 4297553-4307970 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.222 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00010: 4307471-4307970 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.222 0.5kb downstream 0.5kb downstream 10418 true AmTr_v1.0_scaffold00010: 4297053-4307470 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.222 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00010: 4297053-4297552 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.222 1.0kb upstream 1.0kb upstream 10918 true AmTr_v1.0_scaffold00010: 4297553-4308470 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.222 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00010: 4307471-4308470 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.222 1.0kb downstream 1.0kb downstream 10918 true AmTr_v1.0_scaffold00010: 4296553-4307470 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.222 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00010: 4296553-4297552 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.222 2.0kb upstream 2.0kb upstream 11918 true AmTr_v1.0_scaffold00010: 4297553-4309470 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.222 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00010: 4307471-4309470 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.222 2.0kb downstream 2.0kb downstream 11918 true AmTr_v1.0_scaffold00010: 4295553-4307470 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.222 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00010: 4295553-4297552 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.222 5.0kb upstream 5.0kb upstream 14918 true AmTr_v1.0_scaffold00010: 4297553-4312470 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.222 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00010: 4307471-4312470 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.222 5.0kb downstream 5.0kb downstream 14918 true AmTr_v1.0_scaffold00010: 4292553-4307470 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.222 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00010: 4292553-4297552 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.222 10.0kb upstream 10.0kb upstream 19918 true AmTr_v1.0_scaffold00010: 4297553-4317470 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.222 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00010: 4307471-4317470 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.222 10.0kb downstream 10.0kb downstream 19918 true AmTr_v1.0_scaffold00010: 4287553-4307470 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.222 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00010: 4287553-4297552 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048106 5273 Angiosperm View MSA
121347002 5274 Embryophyte View MSA
123380478 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain