Gene : evm_27.TU.AmTr_v1.0_scaffold00010.214 A. trichopoda v1.0
Defline:  (1 of 2) PF12854//PF13041//PF13812 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  213
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00010.214 Secondary Identifier:  ? PAC:31573101
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00010.214 0.5kb upstream 0.5kb upstream 2972 true AmTr_v1.0_scaffold00010: 4182386-4185357 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.214 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00010: 4182386-4182885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.214 0.5kb downstream 0.5kb downstream 2972 true AmTr_v1.0_scaffold00010: 4182886-4185857 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.214 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00010: 4185358-4185857 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.214 1.0kb upstream 1.0kb upstream 3472 true AmTr_v1.0_scaffold00010: 4181886-4185357 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.214 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00010: 4181886-4182885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.214 1.0kb downstream 1.0kb downstream 3472 true AmTr_v1.0_scaffold00010: 4182886-4186357 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.214 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00010: 4185358-4186357 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.214 2.0kb upstream 2.0kb upstream 4472 true AmTr_v1.0_scaffold00010: 4180886-4185357 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.214 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00010: 4180886-4182885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.214 2.0kb downstream 2.0kb downstream 4472 true AmTr_v1.0_scaffold00010: 4182886-4187357 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.214 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00010: 4185358-4187357 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.214 5.0kb upstream 5.0kb upstream 7472 true AmTr_v1.0_scaffold00010: 4177886-4185357 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.214 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00010: 4177886-4182885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.214 5.0kb downstream 5.0kb downstream 7472 true AmTr_v1.0_scaffold00010: 4182886-4190357 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.214 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00010: 4185358-4190357 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.214 10.0kb upstream 10.0kb upstream 12472 true AmTr_v1.0_scaffold00010: 4172886-4185357 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.214 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00010: 4172886-4182885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.214 10.0kb downstream 10.0kb downstream 12472 true AmTr_v1.0_scaffold00010: 4182886-4195357 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.214 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00010: 4185358-4195357 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041778 5273 Angiosperm View MSA
121309888 5274 Embryophyte View MSA
123347524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain