Gene : evm_27.TU.AmTr_v1.0_scaffold00010.302 A. trichopoda v1.0

Genomic Order:  299 Name:  ? evm_27.TU.AmTr_v1.0_scaffold00010.302
Secondary Identifier:  ? PAC:31573079

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00010.302 0.5kb upstream 0.5kb upstream 10099 true AmTr_v1.0_scaffold00010: 5517712-5527810 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.302 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00010: 5527311-5527810 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.302 0.5kb downstream 0.5kb downstream 10099 true AmTr_v1.0_scaffold00010: 5517212-5527310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.302 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00010: 5517212-5517711 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.302 1.0kb upstream 1.0kb upstream 10599 true AmTr_v1.0_scaffold00010: 5517712-5528310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.302 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00010: 5527311-5528310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.302 1.0kb downstream 1.0kb downstream 10599 true AmTr_v1.0_scaffold00010: 5516712-5527310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.302 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00010: 5516712-5517711 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.302 2.0kb upstream 2.0kb upstream 11599 true AmTr_v1.0_scaffold00010: 5517712-5529310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.302 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00010: 5527311-5529310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.302 2.0kb downstream 2.0kb downstream 11599 true AmTr_v1.0_scaffold00010: 5515712-5527310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.302 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00010: 5515712-5517711 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.302 5.0kb upstream 5.0kb upstream 14599 true AmTr_v1.0_scaffold00010: 5517712-5532310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.302 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00010: 5527311-5532310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.302 5.0kb downstream 5.0kb downstream 14599 true AmTr_v1.0_scaffold00010: 5512712-5527310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.302 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00010: 5512712-5517711 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.302 10.0kb upstream 10.0kb upstream 19599 true AmTr_v1.0_scaffold00010: 5517712-5537310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.302 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00010: 5527311-5537310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.302 10.0kb downstream 10.0kb downstream 19599 true AmTr_v1.0_scaffold00010: 5507712-5527310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.302 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00010: 5507712-5517711 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047224 5273 Angiosperm View MSA
121350831 5274 Embryophyte View MSA
123381898 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain