Gene : evm_27.TU.AmTr_v1.0_scaffold00010.117 A. trichopoda v1.0
Defline:  (1 of 2) 2.4.1.83 - Dolichyl-phosphate beta-D-mannosyltransferase / Mannosylphosphoryldolichol synthase Genomic Order:  116
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00010.117 Secondary Identifier:  ? PAC:31573136
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00010.117 0.5kb upstream 0.5kb upstream 833 true AmTr_v1.0_scaffold00010: 2359442-2360274 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.117 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00010: 2359442-2359941 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.117 0.5kb downstream 0.5kb downstream 833 true AmTr_v1.0_scaffold00010: 2359942-2360774 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.117 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00010: 2360275-2360774 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.117 1.0kb upstream 1.0kb upstream 1333 true AmTr_v1.0_scaffold00010: 2358942-2360274 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.117 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00010: 2358942-2359941 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.117 1.0kb downstream 1.0kb downstream 1333 true AmTr_v1.0_scaffold00010: 2359942-2361274 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.117 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00010: 2360275-2361274 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.117 2.0kb upstream 2.0kb upstream 2333 true AmTr_v1.0_scaffold00010: 2357942-2360274 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.117 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00010: 2357942-2359941 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.117 2.0kb downstream 2.0kb downstream 2333 true AmTr_v1.0_scaffold00010: 2359942-2362274 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.117 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00010: 2360275-2362274 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.117 5.0kb upstream 5.0kb upstream 5333 true AmTr_v1.0_scaffold00010: 2354942-2360274 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.117 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00010: 2354942-2359941 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.117 5.0kb downstream 5.0kb downstream 5333 true AmTr_v1.0_scaffold00010: 2359942-2365274 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.117 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00010: 2360275-2365274 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.117 10.0kb upstream 10.0kb upstream 10333 true AmTr_v1.0_scaffold00010: 2349942-2360274 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.117 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00010: 2349942-2359941 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.117 10.0kb downstream 10.0kb downstream 10333 true AmTr_v1.0_scaffold00010: 2359942-2370274 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00010.117 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00010: 2360275-2370274 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048718 5273 Angiosperm View MSA
121349039 5274 Embryophyte View MSA
123381135 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain