Gene : evm_27.TU.AmTr_v1.0_scaffold00012.330 A. trichopoda v1.0
Defline:  (1 of 5) PF05514 - HR-like lesion-inducing (HR_lesion) Genomic Order:  326
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00012.330 Secondary Identifier:  ? PAC:31553004
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00012.330 0.5kb upstream 0.5kb upstream 6995 true AmTr_v1.0_scaffold00012: 7946980-7953974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.330 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00012: 7946980-7947479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.330 0.5kb downstream 0.5kb downstream 6995 true AmTr_v1.0_scaffold00012: 7947480-7954474 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.330 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00012: 7953975-7954474 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.330 1.0kb upstream 1.0kb upstream 7495 true AmTr_v1.0_scaffold00012: 7946480-7953974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.330 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00012: 7946480-7947479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.330 1.0kb downstream 1.0kb downstream 7495 true AmTr_v1.0_scaffold00012: 7947480-7954974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.330 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00012: 7953975-7954974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.330 2.0kb upstream 2.0kb upstream 8495 true AmTr_v1.0_scaffold00012: 7945480-7953974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.330 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00012: 7945480-7947479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.330 2.0kb downstream 2.0kb downstream 8495 true AmTr_v1.0_scaffold00012: 7947480-7955974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.330 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00012: 7953975-7955974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.330 5.0kb upstream 5.0kb upstream 11495 true AmTr_v1.0_scaffold00012: 7942480-7953974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.330 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00012: 7942480-7947479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.330 5.0kb downstream 5.0kb downstream 11495 true AmTr_v1.0_scaffold00012: 7947480-7958974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.330 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00012: 7953975-7958974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.330 10.0kb upstream 10.0kb upstream 16495 true AmTr_v1.0_scaffold00012: 7937480-7953974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.330 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00012: 7937480-7947479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.330 10.0kb downstream 10.0kb downstream 16495 true AmTr_v1.0_scaffold00012: 7947480-7963974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.330 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00012: 7953975-7963974 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050658 5273 Angiosperm View MSA
121351347 5274 Embryophyte View MSA
123426506 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain