Gene : evm_27.TU.AmTr_v1.0_scaffold00012.304 A. trichopoda v1.0
Defline:  (1 of 2) PF00805 - Pentapeptide repeats (8 copies) (Pentapeptide) Genomic Order:  300
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00012.304 Secondary Identifier:  ? PAC:31553007
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00012.304 0.5kb upstream 0.5kb upstream 15707 true AmTr_v1.0_scaffold00012: 7233050-7248756 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.304 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00012: 7248257-7248756 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.304 0.5kb downstream 0.5kb downstream 15707 true AmTr_v1.0_scaffold00012: 7232550-7248256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.304 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00012: 7232550-7233049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.304 1.0kb upstream 1.0kb upstream 16207 true AmTr_v1.0_scaffold00012: 7233050-7249256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.304 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00012: 7248257-7249256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.304 1.0kb downstream 1.0kb downstream 16207 true AmTr_v1.0_scaffold00012: 7232050-7248256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.304 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00012: 7232050-7233049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.304 2.0kb upstream 2.0kb upstream 17207 true AmTr_v1.0_scaffold00012: 7233050-7250256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.304 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00012: 7248257-7250256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.304 2.0kb downstream 2.0kb downstream 17207 true AmTr_v1.0_scaffold00012: 7231050-7248256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.304 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00012: 7231050-7233049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.304 5.0kb upstream 5.0kb upstream 20207 true AmTr_v1.0_scaffold00012: 7233050-7253256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.304 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00012: 7248257-7253256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.304 5.0kb downstream 5.0kb downstream 20207 true AmTr_v1.0_scaffold00012: 7228050-7248256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.304 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00012: 7228050-7233049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.304 10.0kb upstream 10.0kb upstream 25207 true AmTr_v1.0_scaffold00012: 7233050-7258256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.304 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00012: 7248257-7258256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.304 10.0kb downstream 10.0kb downstream 25207 true AmTr_v1.0_scaffold00012: 7223050-7248256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.304 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00012: 7223050-7233049 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045781 5273 Angiosperm View MSA
121346461 5274 Embryophyte View MSA
123426937 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain