Gene : evm_27.TU.AmTr_v1.0_scaffold00012.76 A. trichopoda v1.0
Defline:  (1 of 2) PTHR13377 - PLACENTAL PROTEIN 6 Genomic Order:  76
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00012.76 Secondary Identifier:  ? PAC:31553153
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00012.76 0.5kb upstream 0.5kb upstream 12200 true AmTr_v1.0_scaffold00012: 1987881-2000080 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.76 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00012: 1987881-1988380 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.76 0.5kb downstream 0.5kb downstream 12200 true AmTr_v1.0_scaffold00012: 1988381-2000580 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.76 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00012: 2000081-2000580 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.76 1.0kb upstream 1.0kb upstream 12700 true AmTr_v1.0_scaffold00012: 1987381-2000080 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.76 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00012: 1987381-1988380 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.76 1.0kb downstream 1.0kb downstream 12700 true AmTr_v1.0_scaffold00012: 1988381-2001080 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.76 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00012: 2000081-2001080 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.76 2.0kb upstream 2.0kb upstream 13700 true AmTr_v1.0_scaffold00012: 1986381-2000080 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.76 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00012: 1986381-1988380 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.76 2.0kb downstream 2.0kb downstream 13700 true AmTr_v1.0_scaffold00012: 1988381-2002080 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.76 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00012: 2000081-2002080 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.76 5.0kb upstream 5.0kb upstream 16700 true AmTr_v1.0_scaffold00012: 1983381-2000080 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.76 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00012: 1983381-1988380 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.76 5.0kb downstream 5.0kb downstream 16700 true AmTr_v1.0_scaffold00012: 1988381-2005080 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.76 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00012: 2000081-2005080 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.76 10.0kb upstream 10.0kb upstream 21700 true AmTr_v1.0_scaffold00012: 1978381-2000080 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.76 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00012: 1978381-1988380 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.76 10.0kb downstream 10.0kb downstream 21700 true AmTr_v1.0_scaffold00012: 1988381-2010080 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.76 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00012: 2000081-2010080 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122039224 5273 Angiosperm Singleton cluster - no MSA
121308118 5274 Embryophyte Singleton cluster - no MSA
123345786 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain