Gene : evm_27.TU.AmTr_v1.0_scaffold00012.51 A. trichopoda v1.0
Defline:  (1 of 1) PTHR15835:SF2 - NUCLEAR-INTERACTING PARTNER OF ALK Genomic Order:  51
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00012.51 Secondary Identifier:  ? PAC:31553114
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00012.51 0.5kb upstream 0.5kb upstream 45168 true AmTr_v1.0_scaffold00012: 1167890-1213057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.51 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00012: 1212558-1213057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.51 0.5kb downstream 0.5kb downstream 45168 true AmTr_v1.0_scaffold00012: 1167390-1212557 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.51 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00012: 1167390-1167889 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.51 1.0kb upstream 1.0kb upstream 45668 true AmTr_v1.0_scaffold00012: 1167890-1213557 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.51 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00012: 1212558-1213557 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.51 1.0kb downstream 1.0kb downstream 45668 true AmTr_v1.0_scaffold00012: 1166890-1212557 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.51 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00012: 1166890-1167889 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.51 2.0kb upstream 2.0kb upstream 46668 true AmTr_v1.0_scaffold00012: 1167890-1214557 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.51 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00012: 1212558-1214557 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.51 2.0kb downstream 2.0kb downstream 46668 true AmTr_v1.0_scaffold00012: 1165890-1212557 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.51 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00012: 1165890-1167889 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.51 5.0kb upstream 5.0kb upstream 49668 true AmTr_v1.0_scaffold00012: 1167890-1217557 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.51 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00012: 1212558-1217557 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.51 5.0kb downstream 5.0kb downstream 49668 true AmTr_v1.0_scaffold00012: 1162890-1212557 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.51 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00012: 1162890-1167889 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.51 10.0kb upstream 10.0kb upstream 54668 true AmTr_v1.0_scaffold00012: 1167890-1222557 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.51 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00012: 1212558-1222557 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.51 10.0kb downstream 10.0kb downstream 54668 true AmTr_v1.0_scaffold00012: 1157890-1212557 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.51 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00012: 1157890-1167889 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048012 5273 Angiosperm View MSA
121349794 5274 Embryophyte View MSA
123428489 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain