Gene : evm_27.TU.AmTr_v1.0_scaffold00012.159 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12084 - NUCLEAR PORE GLYCOPROTEIN P62-RELATED Genomic Order:  158
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00012.159 Secondary Identifier:  ? PAC:31552979
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00012.159 0.5kb upstream 0.5kb upstream 47725 true AmTr_v1.0_scaffold00012: 4275316-4323040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.159 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00012: 4322541-4323040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.159 0.5kb downstream 0.5kb downstream 47725 true AmTr_v1.0_scaffold00012: 4274816-4322540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.159 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00012: 4274816-4275315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.159 1.0kb upstream 1.0kb upstream 48225 true AmTr_v1.0_scaffold00012: 4275316-4323540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.159 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00012: 4322541-4323540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.159 1.0kb downstream 1.0kb downstream 48225 true AmTr_v1.0_scaffold00012: 4274316-4322540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.159 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00012: 4274316-4275315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.159 2.0kb upstream 2.0kb upstream 49225 true AmTr_v1.0_scaffold00012: 4275316-4324540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.159 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00012: 4322541-4324540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.159 2.0kb downstream 2.0kb downstream 49225 true AmTr_v1.0_scaffold00012: 4273316-4322540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.159 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00012: 4273316-4275315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.159 5.0kb upstream 5.0kb upstream 52225 true AmTr_v1.0_scaffold00012: 4275316-4327540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.159 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00012: 4322541-4327540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.159 5.0kb downstream 5.0kb downstream 52225 true AmTr_v1.0_scaffold00012: 4270316-4322540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.159 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00012: 4270316-4275315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.159 10.0kb upstream 10.0kb upstream 57225 true AmTr_v1.0_scaffold00012: 4275316-4332540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.159 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00012: 4322541-4332540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.159 10.0kb downstream 10.0kb downstream 57225 true AmTr_v1.0_scaffold00012: 4265316-4322540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.159 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00012: 4265316-4275315 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044271 5273 Angiosperm View MSA
121348594 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain