Gene : evm_27.TU.AmTr_v1.0_scaffold00012.220 A. trichopoda v1.0
Defline:  (1 of 1) KOG4589 - Cell division protein FtsJ Genomic Order:  217
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00012.220 Secondary Identifier:  ? PAC:31553085
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6829 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00012.220 0.5kb upstream 0.5kb upstream 13953 true AmTr_v1.0_scaffold00012: 5706387-5720339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.220 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00012: 5706387-5706886 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.220 0.5kb downstream 0.5kb downstream 13953 true AmTr_v1.0_scaffold00012: 5706887-5720839 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.220 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00012: 5720340-5720839 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.220 1.0kb upstream 1.0kb upstream 14453 true AmTr_v1.0_scaffold00012: 5705887-5720339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.220 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00012: 5705887-5706886 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.220 1.0kb downstream 1.0kb downstream 14453 true AmTr_v1.0_scaffold00012: 5706887-5721339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.220 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00012: 5720340-5721339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.220 2.0kb upstream 2.0kb upstream 15453 true AmTr_v1.0_scaffold00012: 5704887-5720339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.220 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00012: 5704887-5706886 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.220 2.0kb downstream 2.0kb downstream 15453 true AmTr_v1.0_scaffold00012: 5706887-5722339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.220 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00012: 5720340-5722339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.220 5.0kb upstream 5.0kb upstream 18453 true AmTr_v1.0_scaffold00012: 5701887-5720339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.220 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00012: 5701887-5706886 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.220 5.0kb downstream 5.0kb downstream 18453 true AmTr_v1.0_scaffold00012: 5706887-5725339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.220 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00012: 5720340-5725339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.220 10.0kb upstream 10.0kb upstream 23453 true AmTr_v1.0_scaffold00012: 5696887-5720339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.220 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00012: 5696887-5706886 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.220 10.0kb downstream 10.0kb downstream 23453 true AmTr_v1.0_scaffold00012: 5706887-5730339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.220 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00012: 5720340-5730339 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044785 5273 Angiosperm View MSA
121347520 5274 Embryophyte View MSA
123424894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain