Gene : evm_27.TU.AmTr_v1.0_scaffold00012.139 A. trichopoda v1.0
Defline:  (1 of 1) PTHR34675:SF1 - PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 2, CHLOROPLASTIC Genomic Order:  138
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00012.139 Secondary Identifier:  ? PAC:31553199
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00012.139 0.5kb upstream 0.5kb upstream 22634 true AmTr_v1.0_scaffold00012: 3836916-3859549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.139 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00012: 3859050-3859549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.139 0.5kb downstream 0.5kb downstream 22634 true AmTr_v1.0_scaffold00012: 3836416-3859049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.139 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00012: 3836416-3836915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.139 1.0kb upstream 1.0kb upstream 23134 true AmTr_v1.0_scaffold00012: 3836916-3860049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.139 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00012: 3859050-3860049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.139 1.0kb downstream 1.0kb downstream 23134 true AmTr_v1.0_scaffold00012: 3835916-3859049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.139 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00012: 3835916-3836915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.139 2.0kb upstream 2.0kb upstream 24134 true AmTr_v1.0_scaffold00012: 3836916-3861049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.139 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00012: 3859050-3861049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.139 2.0kb downstream 2.0kb downstream 24134 true AmTr_v1.0_scaffold00012: 3834916-3859049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.139 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00012: 3834916-3836915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.139 5.0kb upstream 5.0kb upstream 27134 true AmTr_v1.0_scaffold00012: 3836916-3864049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.139 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00012: 3859050-3864049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.139 5.0kb downstream 5.0kb downstream 27134 true AmTr_v1.0_scaffold00012: 3831916-3859049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.139 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00012: 3831916-3836915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.139 10.0kb upstream 10.0kb upstream 32134 true AmTr_v1.0_scaffold00012: 3836916-3869049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.139 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00012: 3859050-3869049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.139 10.0kb downstream 10.0kb downstream 32134 true AmTr_v1.0_scaffold00012: 3826916-3859049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00012.139 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00012: 3826916-3836915 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046912 5273 Angiosperm View MSA
121344327 5274 Embryophyte View MSA
123426530 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain