Gene : evm_27.TU.AmTr_v1.0_scaffold00011.97 A. trichopoda v1.0
Defline:  (1 of 1) 2.1.3.3 - Ornithine carbamoyltransferase / OTCase Genomic Order:  95
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00011.97 Secondary Identifier:  ? PAC:31560699
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda ARGSYNBSUB-PWY Amborella trichopoda pathologic  
Atrichopoda ARGSYN-PWY Amborella trichopoda pathologic  
Atrichopoda CITRULBIO-PWY Amborella trichopoda pathologic  
Atrichopoda CITRULLINE-DEG-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-4984 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00011.97 0.5kb upstream 0.5kb upstream 18567 true AmTr_v1.0_scaffold00011: 4530089-4548655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.97 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00011: 4530089-4530588 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.97 0.5kb downstream 0.5kb downstream 18567 true AmTr_v1.0_scaffold00011: 4530589-4549155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.97 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00011: 4548656-4549155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.97 1.0kb upstream 1.0kb upstream 19067 true AmTr_v1.0_scaffold00011: 4529589-4548655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.97 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00011: 4529589-4530588 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.97 1.0kb downstream 1.0kb downstream 19067 true AmTr_v1.0_scaffold00011: 4530589-4549655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.97 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00011: 4548656-4549655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.97 2.0kb upstream 2.0kb upstream 20067 true AmTr_v1.0_scaffold00011: 4528589-4548655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.97 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00011: 4528589-4530588 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.97 2.0kb downstream 2.0kb downstream 20067 true AmTr_v1.0_scaffold00011: 4530589-4550655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.97 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00011: 4548656-4550655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.97 5.0kb upstream 5.0kb upstream 23067 true AmTr_v1.0_scaffold00011: 4525589-4548655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.97 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00011: 4525589-4530588 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.97 5.0kb downstream 5.0kb downstream 23067 true AmTr_v1.0_scaffold00011: 4530589-4553655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.97 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00011: 4548656-4553655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.97 10.0kb upstream 10.0kb upstream 28067 true AmTr_v1.0_scaffold00011: 4520589-4548655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.97 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00011: 4520589-4530588 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.97 10.0kb downstream 10.0kb downstream 28067 true AmTr_v1.0_scaffold00011: 4530589-4558655 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.97 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00011: 4548656-4558655 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042632 5273 Angiosperm View MSA
121351468 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain