Gene : evm_27.TU.AmTr_v1.0_scaffold00011.192 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23417//PTHR23417:SF18 - 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE Genomic Order:  187
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00011.192 Secondary Identifier:  ? PAC:31560785
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00011.192 0.5kb upstream 0.5kb upstream 6230 true AmTr_v1.0_scaffold00011: 7621890-7628119 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.192 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00011: 7621890-7622389 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.192 0.5kb downstream 0.5kb downstream 6230 true AmTr_v1.0_scaffold00011: 7622390-7628619 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.192 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00011: 7628120-7628619 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.192 1.0kb upstream 1.0kb upstream 6730 true AmTr_v1.0_scaffold00011: 7621390-7628119 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.192 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00011: 7621390-7622389 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.192 1.0kb downstream 1.0kb downstream 6730 true AmTr_v1.0_scaffold00011: 7622390-7629119 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.192 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00011: 7628120-7629119 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.192 2.0kb upstream 2.0kb upstream 7730 true AmTr_v1.0_scaffold00011: 7620390-7628119 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.192 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00011: 7620390-7622389 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.192 2.0kb downstream 2.0kb downstream 7730 true AmTr_v1.0_scaffold00011: 7622390-7630119 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.192 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00011: 7628120-7630119 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.192 5.0kb upstream 5.0kb upstream 10730 true AmTr_v1.0_scaffold00011: 7617390-7628119 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.192 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00011: 7617390-7622389 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.192 5.0kb downstream 5.0kb downstream 10730 true AmTr_v1.0_scaffold00011: 7622390-7633119 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.192 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00011: 7628120-7633119 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.192 10.0kb upstream 10.0kb upstream 15730 true AmTr_v1.0_scaffold00011: 7612390-7628119 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.192 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00011: 7612390-7622389 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.192 10.0kb downstream 10.0kb downstream 15730 true AmTr_v1.0_scaffold00011: 7622390-7638119 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00011.192 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00011: 7628120-7638119 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047983 5273 Angiosperm View MSA
121345324 5274 Embryophyte View MSA
123425871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain