Gene : evm_27.TU.AmTr_v1.0_scaffold00015.20 A. trichopoda v1.0
Defline:  (1 of 2) PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 Genomic Order:  19
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00015.20 Secondary Identifier:  ? PAC:31555817
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6441 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00015.20 0.5kb upstream 0.5kb upstream 3834 true AmTr_v1.0_scaffold00015: 1051935-1055768 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00015.20 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00015: 1055269-1055768 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00015.20 0.5kb downstream 0.5kb downstream 3834 true AmTr_v1.0_scaffold00015: 1051435-1055268 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00015.20 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00015: 1051435-1051934 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00015.20 1.0kb upstream 1.0kb upstream 4334 true AmTr_v1.0_scaffold00015: 1051935-1056268 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00015.20 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00015: 1055269-1056268 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00015.20 1.0kb downstream 1.0kb downstream 4334 true AmTr_v1.0_scaffold00015: 1050935-1055268 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00015.20 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00015: 1050935-1051934 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00015.20 2.0kb upstream 2.0kb upstream 5334 true AmTr_v1.0_scaffold00015: 1051935-1057268 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00015.20 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00015: 1055269-1057268 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00015.20 2.0kb downstream 2.0kb downstream 5334 true AmTr_v1.0_scaffold00015: 1049935-1055268 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00015.20 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00015: 1049935-1051934 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00015.20 5.0kb upstream 5.0kb upstream 8334 true AmTr_v1.0_scaffold00015: 1051935-1060268 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00015.20 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00015: 1055269-1060268 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00015.20 5.0kb downstream 5.0kb downstream 8334 true AmTr_v1.0_scaffold00015: 1046935-1055268 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00015.20 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00015: 1046935-1051934 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00015.20 10.0kb upstream 10.0kb upstream 13334 true AmTr_v1.0_scaffold00015: 1051935-1065268 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00015.20 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00015: 1055269-1065268 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00015.20 10.0kb downstream 10.0kb downstream 13334 true AmTr_v1.0_scaffold00015: 1041935-1055268 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00015.20 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00015: 1041935-1051934 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051979 5273 Angiosperm View MSA
121312850 5274 Embryophyte View MSA
123349986 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain