Gene : evm_27.TU.AmTr_v1.0_scaffold00014.46 A. trichopoda v1.0
Defline:  (1 of 1) 4.1.1.20 - Diaminopimelate decarboxylase / Meso-2,6-diaminoheptanedioate carboxy-lyase Genomic Order:  45
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00014.46 Secondary Identifier:  ? PAC:31566201
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5097 Amborella trichopoda pathologic  
Atrichopoda PWY-724 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00014.46 0.5kb upstream 0.5kb upstream 13782 true AmTr_v1.0_scaffold00014: 1744925-1758706 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00014.46 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00014: 1758207-1758706 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00014.46 0.5kb downstream 0.5kb downstream 13782 true AmTr_v1.0_scaffold00014: 1744425-1758206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00014.46 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00014: 1744425-1744924 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00014.46 1.0kb upstream 1.0kb upstream 14282 true AmTr_v1.0_scaffold00014: 1744925-1759206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00014.46 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00014: 1758207-1759206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00014.46 1.0kb downstream 1.0kb downstream 14282 true AmTr_v1.0_scaffold00014: 1743925-1758206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00014.46 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00014: 1743925-1744924 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00014.46 2.0kb upstream 2.0kb upstream 15282 true AmTr_v1.0_scaffold00014: 1744925-1760206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00014.46 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00014: 1758207-1760206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00014.46 2.0kb downstream 2.0kb downstream 15282 true AmTr_v1.0_scaffold00014: 1742925-1758206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00014.46 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00014: 1742925-1744924 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00014.46 5.0kb upstream 5.0kb upstream 18282 true AmTr_v1.0_scaffold00014: 1744925-1763206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00014.46 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00014: 1758207-1763206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00014.46 5.0kb downstream 5.0kb downstream 18282 true AmTr_v1.0_scaffold00014: 1739925-1758206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00014.46 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00014: 1739925-1744924 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00014.46 10.0kb upstream 10.0kb upstream 23282 true AmTr_v1.0_scaffold00014: 1744925-1768206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00014.46 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00014: 1758207-1768206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00014.46 10.0kb downstream 10.0kb downstream 23282 true AmTr_v1.0_scaffold00014: 1734925-1758206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00014.46 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00014: 1734925-1744924 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048449 5273 Angiosperm View MSA
121349416 5274 Embryophyte View MSA
123428095 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain