Gene : evm_27.TU.AmTr_v1.0_scaffold00013.246 A. trichopoda v1.0

Defline:  (1 of 1) PTHR10026:SF7 - CYCLIN-C Genomic Order:  244
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00013.246 Secondary Identifier:  ? PAC:31550645

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00013.246 0.5kb upstream 0.5kb upstream 32762 true AmTr_v1.0_scaffold00013: 6967926-7000687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.246 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00013: 6967926-6968425 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.246 0.5kb downstream 0.5kb downstream 32762 true AmTr_v1.0_scaffold00013: 6968426-7001187 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.246 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00013: 7000688-7001187 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.246 1.0kb upstream 1.0kb upstream 33262 true AmTr_v1.0_scaffold00013: 6967426-7000687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.246 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00013: 6967426-6968425 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.246 1.0kb downstream 1.0kb downstream 33262 true AmTr_v1.0_scaffold00013: 6968426-7001687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.246 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00013: 7000688-7001687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.246 2.0kb upstream 2.0kb upstream 34262 true AmTr_v1.0_scaffold00013: 6966426-7000687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.246 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00013: 6966426-6968425 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.246 2.0kb downstream 2.0kb downstream 34262 true AmTr_v1.0_scaffold00013: 6968426-7002687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.246 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00013: 7000688-7002687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.246 5.0kb upstream 5.0kb upstream 37262 true AmTr_v1.0_scaffold00013: 6963426-7000687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.246 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00013: 6963426-6968425 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.246 5.0kb downstream 5.0kb downstream 37262 true AmTr_v1.0_scaffold00013: 6968426-7005687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.246 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00013: 7000688-7005687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.246 10.0kb upstream 10.0kb upstream 42262 true AmTr_v1.0_scaffold00013: 6958426-7000687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.246 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00013: 6958426-6968425 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.246 10.0kb downstream 10.0kb downstream 42262 true AmTr_v1.0_scaffold00013: 6968426-7010687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.246 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00013: 7000688-7010687 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042556 5273 Angiosperm View MSA
123429117 5275 Viridiplantae View MSA
121346319 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain