Gene : evm_27.TU.AmTr_v1.0_scaffold00013.5 A. trichopoda v1.0
Defline:  (1 of 1) 2.1.2.2 - Phosphoribosylglycinamide formyltransferase / Glycinamide ribonucleotide transformylase Genomic Order:  5
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00013.5 Secondary Identifier:  ? PAC:31550648
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6121 Amborella trichopoda pathologic  
Atrichopoda PWY-6613 Amborella trichopoda pathologic  
Atrichopoda PWY-841 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00013.5 0.5kb upstream 0.5kb upstream 18068 true AmTr_v1.0_scaffold00013: 278039-296106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.5 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00013: 278039-278538 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.5 0.5kb downstream 0.5kb downstream 18068 true AmTr_v1.0_scaffold00013: 278539-296606 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.5 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00013: 296107-296606 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.5 1.0kb upstream 1.0kb upstream 18568 true AmTr_v1.0_scaffold00013: 277539-296106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.5 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00013: 277539-278538 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.5 1.0kb downstream 1.0kb downstream 18568 true AmTr_v1.0_scaffold00013: 278539-297106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.5 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00013: 296107-297106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.5 2.0kb upstream 2.0kb upstream 19568 true AmTr_v1.0_scaffold00013: 276539-296106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.5 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00013: 276539-278538 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.5 2.0kb downstream 2.0kb downstream 19568 true AmTr_v1.0_scaffold00013: 278539-298106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.5 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00013: 296107-298106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.5 5.0kb upstream 5.0kb upstream 22568 true AmTr_v1.0_scaffold00013: 273539-296106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.5 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00013: 273539-278538 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.5 5.0kb downstream 5.0kb downstream 22568 true AmTr_v1.0_scaffold00013: 278539-301106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.5 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00013: 296107-301106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.5 10.0kb upstream 10.0kb upstream 27568 true AmTr_v1.0_scaffold00013: 268539-296106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.5 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00013: 268539-278538 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.5 10.0kb downstream 10.0kb downstream 27568 true AmTr_v1.0_scaffold00013: 278539-306106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.5 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00013: 296107-306106 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049914 5273 Angiosperm View MSA
121349551 5274 Embryophyte View MSA
123426469 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain