Gene : evm_27.TU.AmTr_v1.0_scaffold00013.103 A. trichopoda v1.0
Defline:  (1 of 2) PTHR23409 - RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN Genomic Order:  102
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00013.103 Secondary Identifier:  ? PAC:31550739
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Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6126 Amborella trichopoda pathologic  
Atrichopoda PWY-7184 Amborella trichopoda pathologic  
Atrichopoda PWY-7210 Amborella trichopoda pathologic  
Atrichopoda PWY-7211 Amborella trichopoda pathologic  
Atrichopoda PWY-7220 Amborella trichopoda pathologic  
Atrichopoda PWY-7222 Amborella trichopoda pathologic  
Atrichopoda PWY-7226 Amborella trichopoda pathologic  
Atrichopoda PWY-7227 Amborella trichopoda pathologic  
Atrichopoda PWY-7228 Amborella trichopoda pathologic  
Atrichopoda PWY-7229 Amborella trichopoda pathologic  
Atrichopoda PWY-841 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00013.103 0.5kb upstream 0.5kb upstream 1514 true AmTr_v1.0_scaffold00013: 2992887-2994400 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.103 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00013: 2992887-2993386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.103 0.5kb downstream 0.5kb downstream 1514 true AmTr_v1.0_scaffold00013: 2993387-2994900 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.103 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00013: 2994401-2994900 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.103 1.0kb upstream 1.0kb upstream 2014 true AmTr_v1.0_scaffold00013: 2992387-2994400 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.103 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00013: 2992387-2993386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.103 1.0kb downstream 1.0kb downstream 2014 true AmTr_v1.0_scaffold00013: 2993387-2995400 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.103 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00013: 2994401-2995400 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.103 2.0kb upstream 2.0kb upstream 3014 true AmTr_v1.0_scaffold00013: 2991387-2994400 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.103 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00013: 2991387-2993386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.103 2.0kb downstream 2.0kb downstream 3014 true AmTr_v1.0_scaffold00013: 2993387-2996400 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.103 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00013: 2994401-2996400 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.103 5.0kb upstream 5.0kb upstream 6014 true AmTr_v1.0_scaffold00013: 2988387-2994400 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.103 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00013: 2988387-2993386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.103 5.0kb downstream 5.0kb downstream 6014 true AmTr_v1.0_scaffold00013: 2993387-2999400 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.103 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00013: 2994401-2999400 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.103 10.0kb upstream 10.0kb upstream 11014 true AmTr_v1.0_scaffold00013: 2983387-2994400 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.103 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00013: 2983387-2993386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.103 10.0kb downstream 10.0kb downstream 11014 true AmTr_v1.0_scaffold00013: 2993387-3004400 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.103 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00013: 2994401-3004400 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041688 5273 Angiosperm View MSA
121344906 5274 Embryophyte View MSA
123428543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain