Gene : evm_27.TU.AmTr_v1.0_scaffold00013.197 A. trichopoda v1.0
Defline:  (1 of 2) 5.1.3.1 - Ribulose-phosphate 3-epimerase / Xylulose phosphate 3-epimerase Genomic Order:  196
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00013.197 Secondary Identifier:  ? PAC:31550644
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda CALVIN-PWY Amborella trichopoda pathologic  
Atrichopoda NONOXIPENT-PWY Amborella trichopoda pathologic  
Atrichopoda PENTOSE-P-PWY Amborella trichopoda pathologic  
Atrichopoda PHOTOALL-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-5723 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00013.197 0.5kb upstream 0.5kb upstream 19979 true AmTr_v1.0_scaffold00013: 5473021-5492999 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.197 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00013: 5473021-5473520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.197 0.5kb downstream 0.5kb downstream 19979 true AmTr_v1.0_scaffold00013: 5473521-5493499 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.197 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00013: 5493000-5493499 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.197 1.0kb upstream 1.0kb upstream 20479 true AmTr_v1.0_scaffold00013: 5472521-5492999 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.197 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00013: 5472521-5473520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.197 1.0kb downstream 1.0kb downstream 20479 true AmTr_v1.0_scaffold00013: 5473521-5493999 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.197 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00013: 5493000-5493999 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.197 2.0kb upstream 2.0kb upstream 21479 true AmTr_v1.0_scaffold00013: 5471521-5492999 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.197 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00013: 5471521-5473520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.197 2.0kb downstream 2.0kb downstream 21479 true AmTr_v1.0_scaffold00013: 5473521-5494999 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.197 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00013: 5493000-5494999 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.197 5.0kb upstream 5.0kb upstream 24479 true AmTr_v1.0_scaffold00013: 5468521-5492999 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.197 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00013: 5468521-5473520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.197 5.0kb downstream 5.0kb downstream 24479 true AmTr_v1.0_scaffold00013: 5473521-5497999 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.197 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00013: 5493000-5497999 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.197 10.0kb upstream 10.0kb upstream 29479 true AmTr_v1.0_scaffold00013: 5463521-5492999 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.197 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00013: 5463521-5473520 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.197 10.0kb downstream 10.0kb downstream 29479 true AmTr_v1.0_scaffold00013: 5473521-5502999 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00013.197 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00013: 5493000-5502999 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042554 5273 Angiosperm View MSA
121347255 5274 Embryophyte View MSA
123428302 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain