Gene : evm_27.TU.AmTr_v1.0_scaffold00017.285 A. trichopoda v1.0
Defline:  (1 of 1) PTHR22849//PTHR22849:SF34 - WDSAM1 PROTEIN Genomic Order:  282
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00017.285 Secondary Identifier:  ? PAC:31570000
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7511 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00017.285 0.5kb upstream 0.5kb upstream 1703 true AmTr_v1.0_scaffold00017: 7139887-7141589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.285 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00017: 7139887-7140386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.285 0.5kb downstream 0.5kb downstream 1703 true AmTr_v1.0_scaffold00017: 7140387-7142089 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.285 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00017: 7141590-7142089 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.285 1.0kb upstream 1.0kb upstream 2203 true AmTr_v1.0_scaffold00017: 7139387-7141589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.285 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00017: 7139387-7140386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.285 1.0kb downstream 1.0kb downstream 2203 true AmTr_v1.0_scaffold00017: 7140387-7142589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.285 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00017: 7141590-7142589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.285 2.0kb upstream 2.0kb upstream 3203 true AmTr_v1.0_scaffold00017: 7138387-7141589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.285 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00017: 7138387-7140386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.285 2.0kb downstream 2.0kb downstream 3203 true AmTr_v1.0_scaffold00017: 7140387-7143589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.285 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00017: 7141590-7143589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.285 5.0kb upstream 5.0kb upstream 6203 true AmTr_v1.0_scaffold00017: 7135387-7141589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.285 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00017: 7135387-7140386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.285 5.0kb downstream 5.0kb downstream 6203 true AmTr_v1.0_scaffold00017: 7140387-7146589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.285 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00017: 7141590-7146589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.285 10.0kb upstream 10.0kb upstream 11203 true AmTr_v1.0_scaffold00017: 7130387-7141589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.285 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00017: 7130387-7140386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.285 10.0kb downstream 10.0kb downstream 11203 true AmTr_v1.0_scaffold00017: 7140387-7151589 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.285 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00017: 7141590-7151589 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048666 5273 Angiosperm View MSA
121311065 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain