Gene : evm_27.TU.AmTr_v1.0_scaffold00017.27 A. trichopoda v1.0
Defline:  (1 of 43) PF03514 - GRAS domain family (GRAS) Genomic Order:  27
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00017.27 Secondary Identifier:  ? PAC:31570210
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00017.27 0.5kb upstream 0.5kb upstream 1871 true AmTr_v1.0_scaffold00017: 813390-815260 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.27 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00017: 814761-815260 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.27 0.5kb downstream 0.5kb downstream 1871 true AmTr_v1.0_scaffold00017: 812890-814760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.27 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00017: 812890-813389 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.27 1.0kb upstream 1.0kb upstream 2371 true AmTr_v1.0_scaffold00017: 813390-815760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.27 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00017: 814761-815760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.27 1.0kb downstream 1.0kb downstream 2371 true AmTr_v1.0_scaffold00017: 812390-814760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.27 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00017: 812390-813389 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.27 2.0kb upstream 2.0kb upstream 3371 true AmTr_v1.0_scaffold00017: 813390-816760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.27 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00017: 814761-816760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.27 2.0kb downstream 2.0kb downstream 3371 true AmTr_v1.0_scaffold00017: 811390-814760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.27 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00017: 811390-813389 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.27 5.0kb upstream 5.0kb upstream 6371 true AmTr_v1.0_scaffold00017: 813390-819760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.27 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00017: 814761-819760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.27 5.0kb downstream 5.0kb downstream 6371 true AmTr_v1.0_scaffold00017: 808390-814760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.27 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00017: 808390-813389 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.27 10.0kb upstream 10.0kb upstream 11371 true AmTr_v1.0_scaffold00017: 813390-824760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.27 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00017: 814761-824760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.27 10.0kb downstream 10.0kb downstream 11371 true AmTr_v1.0_scaffold00017: 803390-814760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.27 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00017: 803390-813389 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048642 5273 Angiosperm View MSA
121311053 5274 Embryophyte View MSA
123348407 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain