Gene : evm_27.TU.AmTr_v1.0_scaffold00017.171 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10322:SF21 - DNA POLYMERASE ALPHA CATALYTIC SUBUNIT Genomic Order:  170
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00017.171 Secondary Identifier:  ? PAC:31570137
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00017.171 0.5kb upstream 0.5kb upstream 28556 true AmTr_v1.0_scaffold00017: 4506844-4535399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.171 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00017: 4506844-4507343 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.171 0.5kb downstream 0.5kb downstream 28556 true AmTr_v1.0_scaffold00017: 4507344-4535899 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.171 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00017: 4535400-4535899 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.171 1.0kb upstream 1.0kb upstream 29056 true AmTr_v1.0_scaffold00017: 4506344-4535399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.171 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00017: 4506344-4507343 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.171 1.0kb downstream 1.0kb downstream 29056 true AmTr_v1.0_scaffold00017: 4507344-4536399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.171 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00017: 4535400-4536399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.171 2.0kb upstream 2.0kb upstream 30056 true AmTr_v1.0_scaffold00017: 4505344-4535399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.171 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00017: 4505344-4507343 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.171 2.0kb downstream 2.0kb downstream 30056 true AmTr_v1.0_scaffold00017: 4507344-4537399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.171 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00017: 4535400-4537399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.171 5.0kb upstream 5.0kb upstream 33056 true AmTr_v1.0_scaffold00017: 4502344-4535399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.171 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00017: 4502344-4507343 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.171 5.0kb downstream 5.0kb downstream 33056 true AmTr_v1.0_scaffold00017: 4507344-4540399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.171 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00017: 4535400-4540399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.171 10.0kb upstream 10.0kb upstream 38056 true AmTr_v1.0_scaffold00017: 4497344-4535399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.171 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00017: 4497344-4507343 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.171 10.0kb downstream 10.0kb downstream 38056 true AmTr_v1.0_scaffold00017: 4507344-4545399 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.171 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00017: 4535400-4545399 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042985 5273 Angiosperm View MSA
121344859 5274 Embryophyte View MSA
123423980 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain