Gene : evm_27.TU.AmTr_v1.0_scaffold00017.172 A. trichopoda v1.0
Defline:  (1 of 1) 6.3.4.21 - Nicotinate phosphoribosyltransferase / Nicotinic acid phosphoribosyltransferase Genomic Order:  171
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00017.172 Secondary Identifier:  ? PAC:31569960
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5381 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00017.172 0.5kb upstream 0.5kb upstream 41766 true AmTr_v1.0_scaffold00017: 4539058-4580823 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.172 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00017: 4580324-4580823 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.172 0.5kb downstream 0.5kb downstream 41766 true AmTr_v1.0_scaffold00017: 4538558-4580323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.172 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00017: 4538558-4539057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.172 1.0kb upstream 1.0kb upstream 42266 true AmTr_v1.0_scaffold00017: 4539058-4581323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.172 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00017: 4580324-4581323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.172 1.0kb downstream 1.0kb downstream 42266 true AmTr_v1.0_scaffold00017: 4538058-4580323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.172 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00017: 4538058-4539057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.172 2.0kb upstream 2.0kb upstream 43266 true AmTr_v1.0_scaffold00017: 4539058-4582323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.172 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00017: 4580324-4582323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.172 2.0kb downstream 2.0kb downstream 43266 true AmTr_v1.0_scaffold00017: 4537058-4580323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.172 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00017: 4537058-4539057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.172 5.0kb upstream 5.0kb upstream 46266 true AmTr_v1.0_scaffold00017: 4539058-4585323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.172 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00017: 4580324-4585323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.172 5.0kb downstream 5.0kb downstream 46266 true AmTr_v1.0_scaffold00017: 4534058-4580323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.172 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00017: 4534058-4539057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.172 10.0kb upstream 10.0kb upstream 51266 true AmTr_v1.0_scaffold00017: 4539058-4590323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.172 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00017: 4580324-4590323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.172 10.0kb downstream 10.0kb downstream 51266 true AmTr_v1.0_scaffold00017: 4529058-4580323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.172 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00017: 4529058-4539057 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047355 5273 Angiosperm View MSA
121346796 5274 Embryophyte View MSA
123425475 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain