Gene : evm_27.TU.AmTr_v1.0_scaffold00017.118 A. trichopoda v1.0
Defline:  (1 of 5) PF04842 - Plant protein of unknown function (DUF639) (DUF639) Genomic Order:  117
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00017.118 Secondary Identifier:  ? PAC:31570034
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00017.118 0.5kb upstream 0.5kb upstream 42546 true AmTr_v1.0_scaffold00017: 3685172-3727717 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.118 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00017: 3685172-3685671 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.118 0.5kb downstream 0.5kb downstream 42546 true AmTr_v1.0_scaffold00017: 3685672-3728217 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.118 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00017: 3727718-3728217 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.118 1.0kb upstream 1.0kb upstream 43046 true AmTr_v1.0_scaffold00017: 3684672-3727717 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.118 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00017: 3684672-3685671 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.118 1.0kb downstream 1.0kb downstream 43046 true AmTr_v1.0_scaffold00017: 3685672-3728717 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.118 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00017: 3727718-3728717 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.118 2.0kb upstream 2.0kb upstream 44046 true AmTr_v1.0_scaffold00017: 3683672-3727717 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.118 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00017: 3683672-3685671 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.118 2.0kb downstream 2.0kb downstream 44046 true AmTr_v1.0_scaffold00017: 3685672-3729717 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.118 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00017: 3727718-3729717 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.118 5.0kb upstream 5.0kb upstream 47046 true AmTr_v1.0_scaffold00017: 3680672-3727717 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.118 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00017: 3680672-3685671 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.118 5.0kb downstream 5.0kb downstream 47046 true AmTr_v1.0_scaffold00017: 3685672-3732717 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.118 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00017: 3727718-3732717 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.118 10.0kb upstream 10.0kb upstream 52046 true AmTr_v1.0_scaffold00017: 3675672-3727717 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.118 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00017: 3675672-3685671 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.118 10.0kb downstream 10.0kb downstream 52046 true AmTr_v1.0_scaffold00017: 3685672-3737717 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.118 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00017: 3727718-3737717 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042087 5273 Angiosperm View MSA
121347344 5274 Embryophyte View MSA
123380532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain