Gene : evm_27.TU.AmTr_v1.0_scaffold00017.114 A. trichopoda v1.0
Defline:  (1 of 2) PTHR10994:SF78 - RETICULON-LIKE PROTEIN B1-RELATED Genomic Order:  113
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00017.114 Secondary Identifier:  ? PAC:31570072
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00017.114 0.5kb upstream 0.5kb upstream 6296 true AmTr_v1.0_scaffold00017: 3499054-3505349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.114 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00017: 3499054-3499553 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.114 0.5kb downstream 0.5kb downstream 6296 true AmTr_v1.0_scaffold00017: 3499554-3505849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.114 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00017: 3505350-3505849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.114 1.0kb upstream 1.0kb upstream 6796 true AmTr_v1.0_scaffold00017: 3498554-3505349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.114 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00017: 3498554-3499553 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.114 1.0kb downstream 1.0kb downstream 6796 true AmTr_v1.0_scaffold00017: 3499554-3506349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.114 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00017: 3505350-3506349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.114 2.0kb upstream 2.0kb upstream 7796 true AmTr_v1.0_scaffold00017: 3497554-3505349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.114 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00017: 3497554-3499553 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.114 2.0kb downstream 2.0kb downstream 7796 true AmTr_v1.0_scaffold00017: 3499554-3507349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.114 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00017: 3505350-3507349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.114 5.0kb upstream 5.0kb upstream 10796 true AmTr_v1.0_scaffold00017: 3494554-3505349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.114 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00017: 3494554-3499553 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.114 5.0kb downstream 5.0kb downstream 10796 true AmTr_v1.0_scaffold00017: 3499554-3510349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.114 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00017: 3505350-3510349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.114 10.0kb upstream 10.0kb upstream 15796 true AmTr_v1.0_scaffold00017: 3489554-3505349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.114 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00017: 3489554-3499553 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.114 10.0kb downstream 10.0kb downstream 15796 true AmTr_v1.0_scaffold00017: 3499554-3515349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.114 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00017: 3505350-3515349 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049511 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain