Gene : evm_27.TU.AmTr_v1.0_scaffold00016.260 A. trichopoda v1.0
Defline:  (1 of 1) PTHR22942:SF1 - MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG Genomic Order:  256
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00016.260 Secondary Identifier:  ? PAC:31569842
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00016.260 0.5kb upstream 0.5kb upstream 5653 true AmTr_v1.0_scaffold00016: 5717978-5723630 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.260 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00016: 5717978-5718477 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.260 0.5kb downstream 0.5kb downstream 5653 true AmTr_v1.0_scaffold00016: 5718478-5724130 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.260 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00016: 5723631-5724130 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.260 1.0kb upstream 1.0kb upstream 6153 true AmTr_v1.0_scaffold00016: 5717478-5723630 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.260 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00016: 5717478-5718477 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.260 1.0kb downstream 1.0kb downstream 6153 true AmTr_v1.0_scaffold00016: 5718478-5724630 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.260 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00016: 5723631-5724630 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.260 2.0kb upstream 2.0kb upstream 7153 true AmTr_v1.0_scaffold00016: 5716478-5723630 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.260 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00016: 5716478-5718477 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.260 2.0kb downstream 2.0kb downstream 7153 true AmTr_v1.0_scaffold00016: 5718478-5725630 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.260 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00016: 5723631-5725630 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.260 5.0kb upstream 5.0kb upstream 10153 true AmTr_v1.0_scaffold00016: 5713478-5723630 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.260 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00016: 5713478-5718477 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.260 5.0kb downstream 5.0kb downstream 10153 true AmTr_v1.0_scaffold00016: 5718478-5728630 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.260 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00016: 5723631-5728630 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.260 10.0kb upstream 10.0kb upstream 15153 true AmTr_v1.0_scaffold00016: 5708478-5723630 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.260 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00016: 5708478-5718477 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.260 10.0kb downstream 10.0kb downstream 15153 true AmTr_v1.0_scaffold00016: 5718478-5733630 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.260 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00016: 5723631-5733630 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045748 5273 Angiosperm View MSA
121351318 5274 Embryophyte View MSA
123382118 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain