Gene : evm_27.TU.AmTr_v1.0_scaffold00016.40 A. trichopoda v1.0
Defline:  (1 of 2) 2.2.1.2 - Transaldolase / Glycerone transferase Genomic Order:  40
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00016.40 Secondary Identifier:  ? PAC:31569556
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda NONOXIPENT-PWY Amborella trichopoda pathologic  
Atrichopoda PENTOSE-P-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-5723 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00016.40 0.5kb upstream 0.5kb upstream 7317 true AmTr_v1.0_scaffold00016: 831379-838695 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.40 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00016: 838196-838695 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.40 0.5kb downstream 0.5kb downstream 7317 true AmTr_v1.0_scaffold00016: 830879-838195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.40 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00016: 830879-831378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.40 1.0kb upstream 1.0kb upstream 7817 true AmTr_v1.0_scaffold00016: 831379-839195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.40 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00016: 838196-839195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.40 1.0kb downstream 1.0kb downstream 7817 true AmTr_v1.0_scaffold00016: 830379-838195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.40 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00016: 830379-831378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.40 2.0kb upstream 2.0kb upstream 8817 true AmTr_v1.0_scaffold00016: 831379-840195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.40 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00016: 838196-840195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.40 2.0kb downstream 2.0kb downstream 8817 true AmTr_v1.0_scaffold00016: 829379-838195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.40 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00016: 829379-831378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.40 5.0kb upstream 5.0kb upstream 11817 true AmTr_v1.0_scaffold00016: 831379-843195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.40 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00016: 838196-843195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.40 5.0kb downstream 5.0kb downstream 11817 true AmTr_v1.0_scaffold00016: 826379-838195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.40 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00016: 826379-831378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.40 10.0kb upstream 10.0kb upstream 16817 true AmTr_v1.0_scaffold00016: 831379-848195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.40 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00016: 838196-848195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.40 10.0kb downstream 10.0kb downstream 16817 true AmTr_v1.0_scaffold00016: 821379-838195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.40 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00016: 821379-831378 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044911 5273 Angiosperm View MSA
121343866 5274 Embryophyte View MSA
123379934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain