Gene : evm_27.TU.AmTr_v1.0_scaffold00016.367 A. trichopoda v1.0
Defline:  (1 of 2) PF07082 - Protein of unknown function (DUF1350) (DUF1350) Genomic Order:  362
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00016.367 Secondary Identifier:  ? PAC:31569697
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6303 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00016.367 0.5kb upstream 0.5kb upstream 17240 true AmTr_v1.0_scaffold00016: 7487948-7505187 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.367 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00016: 7504688-7505187 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.367 0.5kb downstream 0.5kb downstream 17240 true AmTr_v1.0_scaffold00016: 7487448-7504687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.367 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00016: 7487448-7487947 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.367 1.0kb upstream 1.0kb upstream 17740 true AmTr_v1.0_scaffold00016: 7487948-7505687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.367 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00016: 7504688-7505687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.367 1.0kb downstream 1.0kb downstream 17740 true AmTr_v1.0_scaffold00016: 7486948-7504687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.367 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00016: 7486948-7487947 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.367 2.0kb upstream 2.0kb upstream 18740 true AmTr_v1.0_scaffold00016: 7487948-7506687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.367 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00016: 7504688-7506687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.367 2.0kb downstream 2.0kb downstream 18740 true AmTr_v1.0_scaffold00016: 7485948-7504687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.367 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00016: 7485948-7487947 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.367 5.0kb upstream 5.0kb upstream 21740 true AmTr_v1.0_scaffold00016: 7487948-7509687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.367 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00016: 7504688-7509687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.367 5.0kb downstream 5.0kb downstream 21740 true AmTr_v1.0_scaffold00016: 7482948-7504687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.367 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00016: 7482948-7487947 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.367 10.0kb upstream 10.0kb upstream 26740 true AmTr_v1.0_scaffold00016: 7487948-7514687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.367 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00016: 7504688-7514687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.367 10.0kb downstream 10.0kb downstream 26740 true AmTr_v1.0_scaffold00016: 7477948-7504687 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.367 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00016: 7477948-7487947 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044071 5273 Angiosperm View MSA
121345881 5274 Embryophyte View MSA
123427638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain