Gene : evm_27.TU.AmTr_v1.0_scaffold00016.35 A. trichopoda v1.0
Defline:  (1 of 1) PTHR13483:SF3 - BOX C/D SNORNA PROTEIN 1 Genomic Order:  35
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00016.35 Secondary Identifier:  ? PAC:31569878
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00016.35 0.5kb upstream 0.5kb upstream 5020 true AmTr_v1.0_scaffold00016: 756211-761230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.35 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00016: 756211-756710 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.35 0.5kb downstream 0.5kb downstream 5020 true AmTr_v1.0_scaffold00016: 756711-761730 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.35 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00016: 761231-761730 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.35 1.0kb upstream 1.0kb upstream 5520 true AmTr_v1.0_scaffold00016: 755711-761230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.35 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00016: 755711-756710 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.35 1.0kb downstream 1.0kb downstream 5520 true AmTr_v1.0_scaffold00016: 756711-762230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.35 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00016: 761231-762230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.35 2.0kb upstream 2.0kb upstream 6520 true AmTr_v1.0_scaffold00016: 754711-761230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.35 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00016: 754711-756710 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.35 2.0kb downstream 2.0kb downstream 6520 true AmTr_v1.0_scaffold00016: 756711-763230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.35 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00016: 761231-763230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.35 5.0kb upstream 5.0kb upstream 9520 true AmTr_v1.0_scaffold00016: 751711-761230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.35 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00016: 751711-756710 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.35 5.0kb downstream 5.0kb downstream 9520 true AmTr_v1.0_scaffold00016: 756711-766230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.35 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00016: 761231-766230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.35 10.0kb upstream 10.0kb upstream 14520 true AmTr_v1.0_scaffold00016: 746711-761230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.35 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00016: 746711-756710 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.35 10.0kb downstream 10.0kb downstream 14520 true AmTr_v1.0_scaffold00016: 756711-771230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.35 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00016: 761231-771230 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043413 5273 Angiosperm View MSA
121347000 5274 Embryophyte View MSA
123426353 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain