Gene : evm_27.TU.AmTr_v1.0_scaffold00016.192 A. trichopoda v1.0
Defline:  (1 of 3) PF00612//PF02179 - IQ calmodulin-binding motif (IQ) // BAG domain (BAG) Genomic Order:  189
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00016.192 Secondary Identifier:  ? PAC:31569512
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00016.192 0.5kb upstream 0.5kb upstream 1931 true AmTr_v1.0_scaffold00016: 4309510-4311440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.192 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00016: 4309510-4310009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.192 0.5kb downstream 0.5kb downstream 1931 true AmTr_v1.0_scaffold00016: 4310010-4311940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.192 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00016: 4311441-4311940 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.192 1.0kb upstream 1.0kb upstream 2431 true AmTr_v1.0_scaffold00016: 4309010-4311440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.192 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00016: 4309010-4310009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.192 1.0kb downstream 1.0kb downstream 2431 true AmTr_v1.0_scaffold00016: 4310010-4312440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.192 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00016: 4311441-4312440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.192 2.0kb upstream 2.0kb upstream 3431 true AmTr_v1.0_scaffold00016: 4308010-4311440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.192 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00016: 4308010-4310009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.192 2.0kb downstream 2.0kb downstream 3431 true AmTr_v1.0_scaffold00016: 4310010-4313440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.192 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00016: 4311441-4313440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.192 5.0kb upstream 5.0kb upstream 6431 true AmTr_v1.0_scaffold00016: 4305010-4311440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.192 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00016: 4305010-4310009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.192 5.0kb downstream 5.0kb downstream 6431 true AmTr_v1.0_scaffold00016: 4310010-4316440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.192 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00016: 4311441-4316440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.192 10.0kb upstream 10.0kb upstream 11431 true AmTr_v1.0_scaffold00016: 4300010-4311440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.192 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00016: 4300010-4310009 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.192 10.0kb downstream 10.0kb downstream 11431 true AmTr_v1.0_scaffold00016: 4310010-4321440 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.192 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00016: 4311441-4321440 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048946 5273 Angiosperm View MSA
121350566 5274 Embryophyte View MSA
123381797 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain