Gene : evm_27.TU.AmTr_v1.0_scaffold00016.175 A. trichopoda v1.0
Defline:  (1 of 2) 5.4.99.28 - tRNA pseudouridine(32) synthase / Pseudouridine synthase RluA Genomic Order:  172
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00016.175 Secondary Identifier:  ? PAC:31569687
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00016.175 0.5kb upstream 0.5kb upstream 20777 true AmTr_v1.0_scaffold00016: 3925414-3946190 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.175 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00016: 3945691-3946190 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.175 0.5kb downstream 0.5kb downstream 20777 true AmTr_v1.0_scaffold00016: 3924914-3945690 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.175 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00016: 3924914-3925413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.175 1.0kb upstream 1.0kb upstream 21277 true AmTr_v1.0_scaffold00016: 3925414-3946690 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.175 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00016: 3945691-3946690 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.175 1.0kb downstream 1.0kb downstream 21277 true AmTr_v1.0_scaffold00016: 3924414-3945690 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.175 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00016: 3924414-3925413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.175 2.0kb upstream 2.0kb upstream 22277 true AmTr_v1.0_scaffold00016: 3925414-3947690 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.175 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00016: 3945691-3947690 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.175 2.0kb downstream 2.0kb downstream 22277 true AmTr_v1.0_scaffold00016: 3923414-3945690 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.175 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00016: 3923414-3925413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.175 5.0kb upstream 5.0kb upstream 25277 true AmTr_v1.0_scaffold00016: 3925414-3950690 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.175 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00016: 3945691-3950690 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.175 5.0kb downstream 5.0kb downstream 25277 true AmTr_v1.0_scaffold00016: 3920414-3945690 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.175 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00016: 3920414-3925413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.175 10.0kb upstream 10.0kb upstream 30277 true AmTr_v1.0_scaffold00016: 3925414-3955690 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.175 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00016: 3945691-3955690 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.175 10.0kb downstream 10.0kb downstream 30277 true AmTr_v1.0_scaffold00016: 3915414-3945690 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.175 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00016: 3915414-3925413 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047695 5273 Angiosperm View MSA
121349064 5274 Embryophyte View MSA
123426945 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain