Gene : evm_27.TU.AmTr_v1.0_scaffold00016.221 A. trichopoda v1.0
Defline:  (1 of 26) PF03169 - OPT oligopeptide transporter protein (OPT) Genomic Order:  218
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00016.221 Secondary Identifier:  ? PAC:31569692
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00016.221 0.5kb upstream 0.5kb upstream 3145 true AmTr_v1.0_scaffold00016: 4885457-4888601 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.221 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00016: 4888102-4888601 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.221 0.5kb downstream 0.5kb downstream 3145 true AmTr_v1.0_scaffold00016: 4884957-4888101 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.221 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00016: 4884957-4885456 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.221 1.0kb upstream 1.0kb upstream 3645 true AmTr_v1.0_scaffold00016: 4885457-4889101 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.221 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00016: 4888102-4889101 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.221 1.0kb downstream 1.0kb downstream 3645 true AmTr_v1.0_scaffold00016: 4884457-4888101 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.221 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00016: 4884457-4885456 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.221 2.0kb upstream 2.0kb upstream 4645 true AmTr_v1.0_scaffold00016: 4885457-4890101 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.221 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00016: 4888102-4890101 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.221 2.0kb downstream 2.0kb downstream 4645 true AmTr_v1.0_scaffold00016: 4883457-4888101 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.221 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00016: 4883457-4885456 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.221 5.0kb upstream 5.0kb upstream 7645 true AmTr_v1.0_scaffold00016: 4885457-4893101 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.221 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00016: 4888102-4893101 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.221 5.0kb downstream 5.0kb downstream 7645 true AmTr_v1.0_scaffold00016: 4880457-4888101 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.221 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00016: 4880457-4885456 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.221 10.0kb upstream 10.0kb upstream 12645 true AmTr_v1.0_scaffold00016: 4885457-4898101 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.221 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00016: 4888102-4898101 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.221 10.0kb downstream 10.0kb downstream 12645 true AmTr_v1.0_scaffold00016: 4875457-4888101 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00016.221 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00016: 4875457-4885456 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050939 5273 Angiosperm View MSA
121349024 5274 Embryophyte View MSA
123381128 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain