Gene : evm_27.TU.AmTr_v1.0_scaffold00019.274 A. trichopoda v1.0
Defline:  (1 of 3) PF09177 - Syntaxin 6, N-terminal (Syntaxin-6_N) Genomic Order:  271
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00019.274 Secondary Identifier:  ? PAC:31571919
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00019.274 0.5kb upstream 0.5kb upstream 5297 true AmTr_v1.0_scaffold00019: 4434761-4440057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.274 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00019: 4434761-4435260 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.274 0.5kb downstream 0.5kb downstream 5297 true AmTr_v1.0_scaffold00019: 4435261-4440557 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.274 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00019: 4440058-4440557 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.274 1.0kb upstream 1.0kb upstream 5797 true AmTr_v1.0_scaffold00019: 4434261-4440057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.274 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00019: 4434261-4435260 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.274 1.0kb downstream 1.0kb downstream 5797 true AmTr_v1.0_scaffold00019: 4435261-4441057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.274 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00019: 4440058-4441057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.274 2.0kb upstream 2.0kb upstream 6797 true AmTr_v1.0_scaffold00019: 4433261-4440057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.274 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00019: 4433261-4435260 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.274 2.0kb downstream 2.0kb downstream 6797 true AmTr_v1.0_scaffold00019: 4435261-4442057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.274 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00019: 4440058-4442057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.274 5.0kb upstream 5.0kb upstream 9797 true AmTr_v1.0_scaffold00019: 4430261-4440057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.274 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00019: 4430261-4435260 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.274 5.0kb downstream 5.0kb downstream 9797 true AmTr_v1.0_scaffold00019: 4435261-4445057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.274 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00019: 4440058-4445057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.274 10.0kb upstream 10.0kb upstream 14797 true AmTr_v1.0_scaffold00019: 4425261-4440057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.274 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00019: 4425261-4435260 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.274 10.0kb downstream 10.0kb downstream 14797 true AmTr_v1.0_scaffold00019: 4435261-4450057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.274 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00019: 4440058-4450057 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042907 5273 Angiosperm View MSA
121348883 5274 Embryophyte View MSA
123381058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain