Gene : evm_27.TU.AmTr_v1.0_scaffold00019.19 A. trichopoda v1.0
Defline:  (1 of 28) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  19
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00019.19 Secondary Identifier:  ? PAC:31572185
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00019.19 0.5kb upstream 0.5kb upstream 3872 true AmTr_v1.0_scaffold00019: 327287-331158 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.19 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00019: 330659-331158 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.19 0.5kb downstream 0.5kb downstream 3872 true AmTr_v1.0_scaffold00019: 326787-330658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.19 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00019: 326787-327286 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.19 1.0kb upstream 1.0kb upstream 4372 true AmTr_v1.0_scaffold00019: 327287-331658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.19 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00019: 330659-331658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.19 1.0kb downstream 1.0kb downstream 4372 true AmTr_v1.0_scaffold00019: 326287-330658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.19 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00019: 326287-327286 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.19 2.0kb upstream 2.0kb upstream 5372 true AmTr_v1.0_scaffold00019: 327287-332658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.19 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00019: 330659-332658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.19 2.0kb downstream 2.0kb downstream 5372 true AmTr_v1.0_scaffold00019: 325287-330658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.19 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00019: 325287-327286 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.19 5.0kb upstream 5.0kb upstream 8372 true AmTr_v1.0_scaffold00019: 327287-335658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.19 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00019: 330659-335658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.19 5.0kb downstream 5.0kb downstream 8372 true AmTr_v1.0_scaffold00019: 322287-330658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.19 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00019: 322287-327286 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.19 10.0kb upstream 10.0kb upstream 13372 true AmTr_v1.0_scaffold00019: 327287-340658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.19 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00019: 330659-340658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.19 10.0kb downstream 10.0kb downstream 13372 true AmTr_v1.0_scaffold00019: 317287-330658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.19 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00019: 317287-327286 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045330 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain