Gene : evm_27.TU.AmTr_v1.0_scaffold00019.240 A. trichopoda v1.0
Defline:  (1 of 1) PTHR14190 - SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52 Genomic Order:  237
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00019.240 Secondary Identifier:  ? PAC:31572140
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00019.240 0.5kb upstream 0.5kb upstream 24906 true AmTr_v1.0_scaffold00019: 3827171-3852076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.240 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00019: 3827171-3827670 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.240 0.5kb downstream 0.5kb downstream 24906 true AmTr_v1.0_scaffold00019: 3827671-3852576 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.240 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00019: 3852077-3852576 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.240 1.0kb upstream 1.0kb upstream 25406 true AmTr_v1.0_scaffold00019: 3826671-3852076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.240 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00019: 3826671-3827670 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.240 1.0kb downstream 1.0kb downstream 25406 true AmTr_v1.0_scaffold00019: 3827671-3853076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.240 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00019: 3852077-3853076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.240 2.0kb upstream 2.0kb upstream 26406 true AmTr_v1.0_scaffold00019: 3825671-3852076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.240 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00019: 3825671-3827670 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.240 2.0kb downstream 2.0kb downstream 26406 true AmTr_v1.0_scaffold00019: 3827671-3854076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.240 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00019: 3852077-3854076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.240 5.0kb upstream 5.0kb upstream 29406 true AmTr_v1.0_scaffold00019: 3822671-3852076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.240 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00019: 3822671-3827670 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.240 5.0kb downstream 5.0kb downstream 29406 true AmTr_v1.0_scaffold00019: 3827671-3857076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.240 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00019: 3852077-3857076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.240 10.0kb upstream 10.0kb upstream 34406 true AmTr_v1.0_scaffold00019: 3817671-3852076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.240 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00019: 3817671-3827670 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.240 10.0kb downstream 10.0kb downstream 34406 true AmTr_v1.0_scaffold00019: 3827671-3862076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.240 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00019: 3852077-3862076 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043794 5273 Angiosperm View MSA
121345189 5274 Embryophyte View MSA
123425999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain