Gene : evm_27.TU.AmTr_v1.0_scaffold00019.118 A. trichopoda v1.0
Defline:  (1 of 2) PTHR11387:SF15 - CYTOCHROME C OXIDASE SUBUNIT 6B-1 Genomic Order:  115
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00019.118 Secondary Identifier:  ? PAC:31571977
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-3781 Amborella trichopoda pathologic  
Atrichopoda PWY-7279 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00019.118 0.5kb upstream 0.5kb upstream 6396 true AmTr_v1.0_scaffold00019: 1886008-1892403 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.118 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00019: 1886008-1886507 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.118 0.5kb downstream 0.5kb downstream 6396 true AmTr_v1.0_scaffold00019: 1886508-1892903 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.118 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00019: 1892404-1892903 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.118 1.0kb upstream 1.0kb upstream 6896 true AmTr_v1.0_scaffold00019: 1885508-1892403 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.118 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00019: 1885508-1886507 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.118 1.0kb downstream 1.0kb downstream 6896 true AmTr_v1.0_scaffold00019: 1886508-1893403 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.118 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00019: 1892404-1893403 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.118 2.0kb upstream 2.0kb upstream 7896 true AmTr_v1.0_scaffold00019: 1884508-1892403 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.118 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00019: 1884508-1886507 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.118 2.0kb downstream 2.0kb downstream 7896 true AmTr_v1.0_scaffold00019: 1886508-1894403 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.118 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00019: 1892404-1894403 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.118 5.0kb upstream 5.0kb upstream 10896 true AmTr_v1.0_scaffold00019: 1881508-1892403 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.118 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00019: 1881508-1886507 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.118 5.0kb downstream 5.0kb downstream 10896 true AmTr_v1.0_scaffold00019: 1886508-1897403 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.118 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00019: 1892404-1897403 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.118 10.0kb upstream 10.0kb upstream 15896 true AmTr_v1.0_scaffold00019: 1876508-1892403 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.118 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00019: 1876508-1886507 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.118 10.0kb downstream 10.0kb downstream 15896 true AmTr_v1.0_scaffold00019: 1886508-1902403 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.118 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00019: 1892404-1902403 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042170 5273 Angiosperm View MSA
121351047 5274 Embryophyte View MSA
123424784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain