Gene : evm_27.TU.AmTr_v1.0_scaffold00019.105 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12103:SF12 - 5'-NUCLEOTIDASE DOMAIN-CONTAINING PROTEIN DDB_G0275467 Genomic Order:  103
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00019.105 Secondary Identifier:  ? PAC:31572198
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5381 Amborella trichopoda pathologic  
Atrichopoda PWY-5695 Amborella trichopoda pathologic  
Atrichopoda PWY-6596 Amborella trichopoda pathologic  
Atrichopoda PWY-6606 Amborella trichopoda pathologic  
Atrichopoda PWY-6608 Amborella trichopoda pathologic  
Atrichopoda PWY-7185 Amborella trichopoda pathologic  
Atrichopoda SALVADEHYPOX-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00019.105 0.5kb upstream 0.5kb upstream 23694 true AmTr_v1.0_scaffold00019: 1702141-1725834 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.105 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00019: 1725335-1725834 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.105 0.5kb downstream 0.5kb downstream 23694 true AmTr_v1.0_scaffold00019: 1701641-1725334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.105 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00019: 1701641-1702140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.105 1.0kb upstream 1.0kb upstream 24194 true AmTr_v1.0_scaffold00019: 1702141-1726334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.105 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00019: 1725335-1726334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.105 1.0kb downstream 1.0kb downstream 24194 true AmTr_v1.0_scaffold00019: 1701141-1725334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.105 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00019: 1701141-1702140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.105 2.0kb upstream 2.0kb upstream 25194 true AmTr_v1.0_scaffold00019: 1702141-1727334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.105 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00019: 1725335-1727334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.105 2.0kb downstream 2.0kb downstream 25194 true AmTr_v1.0_scaffold00019: 1700141-1725334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.105 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00019: 1700141-1702140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.105 5.0kb upstream 5.0kb upstream 28194 true AmTr_v1.0_scaffold00019: 1702141-1730334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.105 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00019: 1725335-1730334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.105 5.0kb downstream 5.0kb downstream 28194 true AmTr_v1.0_scaffold00019: 1697141-1725334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.105 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00019: 1697141-1702140 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.105 10.0kb upstream 10.0kb upstream 33194 true AmTr_v1.0_scaffold00019: 1702141-1735334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.105 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00019: 1725335-1735334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.105 10.0kb downstream 10.0kb downstream 33194 true AmTr_v1.0_scaffold00019: 1692141-1725334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00019.105 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00019: 1692141-1702140 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047962 5273 Angiosperm View MSA
121348672 5274 Embryophyte View MSA
123428872 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain