Gene : evm_27.TU.AmTr_v1.0_scaffold00018.155 A. trichopoda v1.0
Defline:  (1 of 4) 2.3.1.119//2.3.1.199 - Very-long-chain 3-oxoacyl-CoA synthase / Very-long-chain beta-ketoacyl-CoA synthase Genomic Order:  152
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00018.155 Secondary Identifier:  ? PAC:31557430
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5080 Amborella trichopoda pathologic  
Atrichopoda PWY-6433 Amborella trichopoda pathologic  
Atrichopoda PWY-6598 Amborella trichopoda pathologic  
Atrichopoda PWY-7036 Amborella trichopoda pathologic  
Atrichopoda PWY-7601 Amborella trichopoda pathologic  
Atrichopoda PWY-7606 Amborella trichopoda pathologic  
Atrichopoda PWY-7619 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00018.155 0.5kb upstream 0.5kb upstream 2120 true AmTr_v1.0_scaffold00018: 5921309-5923428 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.155 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00018: 5921309-5921808 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.155 0.5kb downstream 0.5kb downstream 2120 true AmTr_v1.0_scaffold00018: 5921809-5923928 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.155 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00018: 5923429-5923928 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.155 1.0kb upstream 1.0kb upstream 2620 true AmTr_v1.0_scaffold00018: 5920809-5923428 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.155 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00018: 5920809-5921808 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.155 1.0kb downstream 1.0kb downstream 2620 true AmTr_v1.0_scaffold00018: 5921809-5924428 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.155 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00018: 5923429-5924428 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.155 2.0kb upstream 2.0kb upstream 3620 true AmTr_v1.0_scaffold00018: 5919809-5923428 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.155 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00018: 5919809-5921808 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.155 2.0kb downstream 2.0kb downstream 3620 true AmTr_v1.0_scaffold00018: 5921809-5925428 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.155 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00018: 5923429-5925428 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.155 5.0kb upstream 5.0kb upstream 6620 true AmTr_v1.0_scaffold00018: 5916809-5923428 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.155 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00018: 5916809-5921808 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.155 5.0kb downstream 5.0kb downstream 6620 true AmTr_v1.0_scaffold00018: 5921809-5928428 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.155 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00018: 5923429-5928428 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.155 10.0kb upstream 10.0kb upstream 11620 true AmTr_v1.0_scaffold00018: 5911809-5923428 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.155 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00018: 5911809-5921808 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.155 10.0kb downstream 10.0kb downstream 11620 true AmTr_v1.0_scaffold00018: 5921809-5933428 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00018.155 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00018: 5923429-5933428 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048379 5273 Angiosperm View MSA
121310944 5274 Embryophyte View MSA
123348313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain