Gene : evm_27.TU.AmTr_v1.0_scaffold00021.242 A. trichopoda v1.0
Defline:  (1 of 28) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  241
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00021.242 Secondary Identifier:  ? PAC:31563295
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00021.242 0.5kb upstream 0.5kb upstream 2447 true AmTr_v1.0_scaffold00021: 5301211-5303657 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.242 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00021: 5301211-5301710 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.242 0.5kb downstream 0.5kb downstream 2447 true AmTr_v1.0_scaffold00021: 5301711-5304157 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.242 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00021: 5303658-5304157 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.242 1.0kb upstream 1.0kb upstream 2947 true AmTr_v1.0_scaffold00021: 5300711-5303657 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.242 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00021: 5300711-5301710 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.242 1.0kb downstream 1.0kb downstream 2947 true AmTr_v1.0_scaffold00021: 5301711-5304657 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.242 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00021: 5303658-5304657 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.242 2.0kb upstream 2.0kb upstream 3947 true AmTr_v1.0_scaffold00021: 5299711-5303657 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.242 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00021: 5299711-5301710 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.242 2.0kb downstream 2.0kb downstream 3947 true AmTr_v1.0_scaffold00021: 5301711-5305657 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.242 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00021: 5303658-5305657 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.242 5.0kb upstream 5.0kb upstream 6947 true AmTr_v1.0_scaffold00021: 5296711-5303657 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.242 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00021: 5296711-5301710 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.242 5.0kb downstream 5.0kb downstream 6947 true AmTr_v1.0_scaffold00021: 5301711-5308657 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.242 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00021: 5303658-5308657 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.242 10.0kb upstream 10.0kb upstream 11947 true AmTr_v1.0_scaffold00021: 5291711-5303657 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.242 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00021: 5291711-5301710 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.242 10.0kb downstream 10.0kb downstream 11947 true AmTr_v1.0_scaffold00021: 5301711-5313657 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.242 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00021: 5303658-5313657 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041559 5273 Angiosperm View MSA
121309863 5274 Embryophyte View MSA
123347506 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain