Gene : evm_27.TU.AmTr_v1.0_scaffold00021.180 A. trichopoda v1.0

Defline:  (1 of 1) PTHR10751//PTHR10751:SF44 - GUANYLATE BINDING PROTEIN Genomic Order:  179
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00021.180 Secondary Identifier:  ? PAC:31563271

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00021.180 0.5kb upstream 0.5kb upstream 30915 true AmTr_v1.0_scaffold00021: 3966316-3997230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.180 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00021: 3966316-3966815 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.180 0.5kb downstream 0.5kb downstream 30915 true AmTr_v1.0_scaffold00021: 3966816-3997730 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.180 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00021: 3997231-3997730 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.180 1.0kb upstream 1.0kb upstream 31415 true AmTr_v1.0_scaffold00021: 3965816-3997230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.180 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00021: 3965816-3966815 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.180 1.0kb downstream 1.0kb downstream 31415 true AmTr_v1.0_scaffold00021: 3966816-3998230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.180 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00021: 3997231-3998230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.180 2.0kb upstream 2.0kb upstream 32415 true AmTr_v1.0_scaffold00021: 3964816-3997230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.180 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00021: 3964816-3966815 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.180 2.0kb downstream 2.0kb downstream 32415 true AmTr_v1.0_scaffold00021: 3966816-3999230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.180 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00021: 3997231-3999230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.180 5.0kb upstream 5.0kb upstream 35415 true AmTr_v1.0_scaffold00021: 3961816-3997230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.180 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00021: 3961816-3966815 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.180 5.0kb downstream 5.0kb downstream 35415 true AmTr_v1.0_scaffold00021: 3966816-4002230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.180 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00021: 3997231-4002230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.180 10.0kb upstream 10.0kb upstream 40415 true AmTr_v1.0_scaffold00021: 3956816-3997230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.180 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00021: 3956816-3966815 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.180 10.0kb downstream 10.0kb downstream 40415 true AmTr_v1.0_scaffold00021: 3966816-4007230 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00021.180 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00021: 3997231-4007230 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041640 5273 Angiosperm View MSA
121347884 5274 Embryophyte View MSA
123426529 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain